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    wbbI beta-1,6-galactofuranosyltransferase WbbI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947041, updated on 3-Dec-2024

    Summary

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    Official Symbol
    wbbI
    Official Full Name
    beta-1,6-galactofuranosyltransferase WbbI
    Primary source
    ECOCYC:EG11983
    Locus tag
    b2034
    See related
    ASAP:ABE-0006751
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2028; yefG
    Summary
    WbbI is a -1,6-galactofuranosyltransferase that uses UDP-galactofuranose as the donor and has a modest preference for pyranoside acceptor substrates of the -D-gluco configuration . [More information is available at EcoCyc: EG11983].
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    Genomic context

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    Sequence:
    NC_000913.3 (2105065..2106057, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative glycosyltransferase WbbK Neighboring gene putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ Neighboring gene putative O-antigen polymerase Neighboring gene UDP-galactopyranose mutase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Synthesis of a tetrasaccharide related to the repeating unit of the O-antigen from Escherichia coli K-12. Roy B, et al. Carbohydr Res, 2009 Nov 23. PMID 19836012
    2. Expression and initial characterization of WbbI, a putative D-Galf:alpha-D-Glc beta-1,6-galactofuranosyltransferase from Escherichia coli K-12. Wing C, et al. Org Biomol Chem, 2006 Nov 7. PMID 17047874
    3. Structure of the O antigen of Escherichia coli K-12 and the sequence of its rfb gene cluster. Stevenson G, et al. J Bacteriol, 1994 Jul. PMID 7517391, Free PMC Article
    4. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
    5. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. WbbI showed a modest preference for pyranoside acceptor substrates of the alpha-D-gluco-configuration but it also possessed the ability to turn-over acceptor analogues.
      Title: Expression and initial characterization of WbbI, a putative D-Galf:alpha-D-Glc beta-1,6-galactofuranosyltransferase from Escherichia coli K-12.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables lipopolysaccharide-1,6-galactosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipopolysaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    beta-1,6-galactofuranosyltransferase WbbI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2105065..2106057 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416538.1 beta-1,6-galactofuranosyltransferase WbbI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416538.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0A8J2Q6
      Conserved Domains (1) summary
      PRK09814
      Location:1 → 327
      PRK09814; sugar transferase
    Nucleotide Protein
    Heading Accession and Version

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