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    ycjT kojibiose phosphorylase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945895, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycjT
    Official Full Name
    kojibiose phosphorylase
    Primary source
    ECOCYC:G6654
    Locus tag
    b1316
    See related
    ASAP:ABE-0004418
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1311
    Summary
    Part of the putative ycjM-V operon, which encodes a putative transport and catabolism system for an unknown sugar. [More information is available at EcoGene: EG13917].
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    Genomic context

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    Sequence:
    NC_000913.3 (1377884..1380151)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene D-guloside 3-dehydrogenase Neighboring gene 3-dehydro-D-guloside 4-epimerase Neighboring gene D-glucoside 3-dehydrogenase Neighboring gene beta-phosphoglucomutase Neighboring gene pseudo Neighboring gene pseudo Neighboring gene outer membrane porin G

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Discovery of a Kojibiose Phosphorylase in Escherichia coli K-12. Mukherjee K, et al. Biochemistry, 2018 May 15. PMID 29684280, Free PMC Article
    2. Physiological studies of Escherichia coli strain MG1655: growth defects and apparent cross-regulation of gene expression. Soupene E, et al. J Bacteriol, 2003 Sep. PMID 12949114, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables kojibiose phosphorylase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables kojibiose phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    kojibiose phosphorylase
    NP_415832.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1377884..1380151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415832.1 kojibiose phosphorylase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415832.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8NA49
      Conserved Domains (1) summary
      COG1554
      Location:1 → 753
      ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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