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    ygjH putative tRNA-binding protein YgjH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946251, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ygjH
    Official Full Name
    putative tRNA-binding protein YgjH
    Primary source
    ECOCYC:G7597
    Locus tag
    b3074
    See related
    ASAP:ABE-0010094
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3064
    Summary
    YgjH is homologous to the methionyl tRNA synthase dimerization appendix. [More information is available at EcoGene: EG12719].
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    Genomic context

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    Sequence:
    NC_000913.3 (3220915..3221247, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene aerotaxis receptor Neighboring gene putrescine aminotransferase Neighboring gene DNA-binding transcriptional repressor EbgR Neighboring gene evolved beta-D-galactosidase subunit alpha Neighboring gene DUF386 domain-containing evolved beta-D-galactosidase subunit beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of trbp111: a structure-specific tRNA-binding protein. Swairjo MA, et al. EMBO J, 2000 Dec 1. PMID 11101501, Free PMC Article
    2. Effects of pre-protein overexpression on SecB synthesis in Escherichia coli. Müller JP. FEMS Microbiol Lett, 1999 Jul 1. PMID 10418149
    3. Identification of Attenuators of Transcriptional Termination: Implications for RNA Regulation in Escherichia coli. Morita T, et al. mBio, 2022 Dec 20. PMID 36226957, Free PMC Article
    4. Gene targeting using randomly inserted group II introns (targetrons) recovered from an Escherichia coli gene disruption library. Yao J, et al. Nucleic Acids Res, 2005. PMID 15947133, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Identification of Attenuators of Transcriptional Termination: Implications for RNA Regulation in Escherichia coli.
      Title: Identification of Attenuators of Transcriptional Termination: Implications for RNA Regulation in Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative tRNA-binding protein YgjH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3220915..3221247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417545.1 putative tRNA-binding protein YgjH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417545.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7F6B0
      Conserved Domains (1) summary
      PRK10089
      Location:1 → 110
      PRK10089; chaperone CsaA
    Nucleotide Protein
    Heading Accession and Version

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