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    yfdM putative methyltransferase YfdM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945416, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfdM
    Official Full Name
    putative methyltransferase YfdM
    Primary source
    ECOCYC:G7225
    Locus tag
    b2356
    See related
    ASAP:ABE-0007775
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2350; yzyB
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    Genomic context

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    Sequence:
    NC_000913.3 (2472112..2472387, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene putative tail fiber assembly protein YfdK Neighboring gene pseudo Neighboring gene uncharacterized protein YfdN Neighboring gene protein YdfO Neighboring gene uncharacterized protein YfdP

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phages Mediate Bacterial Self-Recognition. Song S, et al. Cell Rep, 2019 Apr 16. PMID 30995473
    2. Nucleotide sequence of the gene responsible for D-xylose uptake in Escherichia coli. Kurose N, et al. Nucleic Acids Res, 1986 Sep 11. PMID 3532033, Free PMC Article
    3. Control and regulation of KplE1 prophage site-specific recombination: a new recombination module analyzed. Panis G, et al. J Biol Chem, 2007 Jul 27. PMID 17545146
    4. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables site-specific DNA-methyltransferase (adenine-specific) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA restriction-modification system IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within viral process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative methyltransferase YfdM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2472112..2472387 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518803.1 putative methyltransferase YfdM [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377E1H4
      Conserved Domains (1) summary
      cl05442
      Location:14 → 89
      Dam; DNA N-6-adenine-methyltransferase (Dam)
    Nucleotide Protein
    Heading Accession and Version

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