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    garK glycerate 2-kinase 1 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947632, updated on 3-Dec-2024

    Summary

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    Official Symbol
    garK
    Official Full Name
    glycerate 2-kinase 1
    Primary source
    ECOCYC:EG11175
    Locus tag
    b3124
    See related
    ASAP:ABE-0010271
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3112; yhaD
    Summary
    Glycerate kinase I (GKI), encoded by garK, catalyzes the formation of 2-phosphoglycerate from D-glycerate . [More information is available at EcoCyc: EG11175].
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    Genomic context

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    Sequence:
    NC_000913.3 (3270625..3271770, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YhaC Neighboring gene ncRNA Neighboring gene tartronate semialdehyde reductase Neighboring gene alpha-dehydro-beta-deoxy-D-glucarate aldolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An in vivo metabolic approach for deciphering the product specificity of glycerate kinase proves that both E. coli's glycerate kinases generate 2-phosphoglycerate. Zelcbuch L, et al. PLoS One, 2015. PMID 25823014, Free PMC Article
    2. Two forms of D-glycerate kinase in Escherichia coli. Ornston MK, et al. J Bacteriol, 1969 Mar. PMID 4887503, Free PMC Article
    3. Precise mapping of the rnpB gene encoding the RNA component of RNase P in Escherichia coli K-12. Komine Y, et al. J Bacteriol, 1991 Mar. PMID 1705543, Free PMC Article
    4. Processing of the precursor to the catalytic RNA subunit of RNase P from Escherichia coli. Lundberg U, et al. RNA, 1995 May. PMID 7489504, Free PMC Article
    5. A common regulator for the operons encoding the enzymes involved in D-galactarate, D-glucarate, and D-glycerate utilization in Escherichia coli. Monterrubio R, et al. J Bacteriol, 2000 May. PMID 10762278, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycerate 2-kinase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables glycerate 2-kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glycerate 2-kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycerate 2-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycerate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within D-glucarate catabolic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within galactarate catabolic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in organic acid phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    glycerate 2-kinase 1
    NP_417593.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3270625..3271770 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417593.4 glycerate 2-kinase 1 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417593.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6PTW0
      Conserved Domains (1) summary
      PRK10342
      Location:1 → 381
      PRK10342; glycerate kinase I; Provisional
    Nucleotide Protein
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