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    ylaC putative inner membrane protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948876, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ylaC
    Official Full Name
    putative inner membrane protein
    Primary source
    ECOCYC:G6253
    Locus tag
    b0458
    See related
    ASAP:ABE-0001587
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0452
    Summary
    YlaC is an inner membrane protein with two predicted transmembrane domains. [More information is available at EcoCyc: G6253].
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    Genomic context

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    Sequence:
    NC_000913.3 (478781..479251, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1428 domain-containing protein YbaA Neighboring gene c-di-GMP phosphodiesterase PdeB Neighboring gene maltose O-acetyltransferase Neighboring gene hemolysin expression-modulating protein Hha

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    2. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative inner membrane protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      478781..479251 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414991.4 putative inner membrane protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414991.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AKI8
      Conserved Domains (1) summary
      pfam10777
      Location:1 → 153
      YlaC; Inner membrane protein YlaC
    Nucleotide Protein
    Heading Accession and Version

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