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    nfrB cyclic di-3',5'-guanylate-activated glycosyltransferase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945849, updated on 3-Dec-2024

    Summary

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    Official Symbol
    nfrB
    Official Full Name
    cyclic di-3',5'-guanylate-activated glycosyltransferase
    Primary source
    ECOCYC:EG11739
    Locus tag
    b0569
    See related
    ASAP:ABE-0001942
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0561
    Summary
    Isolation of spontaneous N4 bacteriophage-resistant mutants of Escherichia coli K-12 strain SC1100, cloning of the affected genes, and subsequent complementation experiments revealed that nfrB is important in N4 adsorption. [More information is available at EcoCyc: EG11739].
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    Genomic context

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    Sequence:
    NC_000913.3 (590941..593178, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional activator EnvY Neighboring gene putative exopolysaccharide secretion system auxiliary component Neighboring gene exopolysaccharide secretion system outer membrane protein NfrA Neighboring gene sensor histidine kinase CusS Neighboring gene DNA-binding transcriptional activator CusR Neighboring gene copper/silver export system outer membrane channel

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [Biochemical bases for the effect of combining kanamycin and nitrofuran resistance genes in Escherichia coli cells]. Morozov GI, et al. Mol Gen Mikrobiol Virusol, 1994 Mar-Apr. PMID 8183300
    2. Genetic analysis of bacteriophage N4 adsorption. Kiino DR, et al. J Bacteriol, 1989 Sep. PMID 2670887, Free PMC Article
    3. Two overlapping genes encoding membrane proteins required for bacteriophage N4 adsorption. Kiino DR, et al. J Bacteriol, 1993 Nov. PMID 8226649, Free PMC Article
    4. A Novel Locally c-di-GMP-Controlled Exopolysaccharide Synthase Required for Bacteriophage N4 Infection of Escherichia coli. Junkermeier EH, et al. mBio, 2021 Dec 21. PMID 34903052, Free PMC Article
    5. A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map. Oshima T, et al. DNA Res, 1996 Jun 30. PMID 8905232

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A Novel Locally c-di-GMP-Controlled Exopolysaccharide Synthase Required for Bacteriophage N4 Infection of Escherichia coli.
      Title: A Novel Locally c-di-GMP-Controlled Exopolysaccharide Synthase Required for Bacteriophage N4 Infection of Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables cyclic-di-GMP binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycosyltransferase activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in polysaccharide biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in protein secretion by the type II secretion system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    part_of type II protein secretion system complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    cyclic di-3',5'-guanylate-activated glycosyltransferase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      590941..593178 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415101.1 cyclic di-3',5'-guanylate-activated glycosyltransferase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415101.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A895NSX0
      Conserved Domains (1) summary
      PRK11234
      Location:7 → 737
      nfrB; phage adsorption protein NrfB
    Nucleotide Protein
    Heading Accession and Version

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