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    tusE sulfur transfer protein TusE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945023, updated on 17-Dec-2024

    Summary

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    Official Symbol
    tusE
    Official Full Name
    sulfur transfer protein TusE
    Primary source
    ECOCYC:EG12876
    Locus tag
    b0969
    See related
    ASAP:ABE-0003278
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0960; yccK
    Summary
    The gene name tus has already been used as a primary gene name, so tusA-E are kept as synonyms in EcoGene. [More information is available at EcoGene: EG12876]. TusE functions as a sulfur mediator during synthesis of 2-thiouridine of the modified wobble base mnm5s2U in tRNA. [More information is available at EcoCyc: EG12876].
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    Genomic context

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    Sequence:
    NC_000913.3 (1030339..1030668, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene heat shock protein HspQ Neighboring gene 23S rRNA m(5)C1962 methyltransferase Neighboring gene acylphosphatase Neighboring gene modulator of FtsH protease Neighboring gene tRNA-Ser

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The E. coli divE mutation, which differentially inhibits synthesis of certain proteins, is in tRNASer1. Tamura F, et al. EMBO J, 1984 May. PMID 6376117, Free PMC Article
    2. Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Numata T, et al. Structure, 2006 Feb. PMID 16472754
    3. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    4. A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map. Oshima T, et al. DNA Res, 1996 Jun 30. PMID 8905232
    5. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables sulfur carrier activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables sulfur carrier activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in tRNA wobble position uridine thiolation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in tRNA wobble position uridine thiolation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within tRNA wobble position uridine thiolation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in tRNA wobble position uridine thiolation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of sulfurtransferase complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sulfur transfer protein TusE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1030339..1030668 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415489.4 sulfur transfer protein TusE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415489.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W1WYH4
      Conserved Domains (1) summary
      PRK11508
      Location:1 → 109
      PRK11508; sulfurtransferase TusE
    Nucleotide Protein
    Heading Accession and Version

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