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    pepT peptidase T [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946333, updated on 3-Dec-2024

    Summary

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    Official Symbol
    pepT
    Official Full Name
    peptidase T
    Primary source
    ECOCYC:EG11549
    Locus tag
    b1127
    See related
    ASAP:ABE-0003800
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1113
    Summary
    HT_Cmplx34_Cyt: [More information is available at EcoGene: EG11549]. Peptidase T is a tripeptidase that is upregulated in sessile bacteria growing in biofilms . [More information is available at EcoCyc: EG11549].
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    Genomic context

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    Sequence:
    NC_000913.3 (1185844..1187070)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene spermidine preferential ABC transporter membrane subunit PotC Neighboring gene spermidine preferential ABC transporter membrane subunit PotB Neighboring gene spermidine preferential ABC transporter ATP binding subunit Neighboring gene 50S ribosomal protein L16-arginine 3-hydroxylase Neighboring gene sensor histidine kinase PhoQ Neighboring gene DNA-binding transcriptional dual regulator PhoP

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of peptidase T from Salmonella typhimurium. Håkansson K, et al. Eur J Biochem, 2002 Jan. PMID 11856302
    2. Tripeptide-specific aminopeptidase from Escherichia coli AJ005. Hermsdorf CL. Biochemistry, 1978 Aug 8. PMID 356879
    3. Soluble tri- and dipeptidases in Escherichia coli K-12+. Simmonds S, et al. Biochemistry, 1976 Jan 27. PMID 764862
    4. Peptidases in Escherichia coli K-12 capable of cleaving lysine homopeptides. Sussman AJ, et al. J Biol Chem, 1970 Dec 25. PMID 4991642
    5. Crystallization of peptidase T from Salmonella typhimurium. Håkansson K, et al. Acta Crystallogr D Biol Crystallogr, 2000 Jul. PMID 10930847

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tripeptide aminopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables tripeptide aminopeptidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tripeptide aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in peptide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within peptide metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in peptide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidase T
    NP_415645.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1185844..1187070
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415645.1 peptidase T [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415645.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V2GE95, A0A2X1PLI6, A0A3R0MPJ9
      Conserved Domains (1) summary
      PRK05469
      Location:1 → 408
      PRK05469; tripeptide aminopeptidase PepT
    Nucleotide Protein
    Heading Accession and Version

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