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    rrfA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948345, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rrfA
    Primary source
    ECOCYC:EG30070
    Locus tag
    b3855
    See related
    ASAP:ABE-0012588
    Gene type
    rRNA
    RNA name
    5S ribosomal RNA
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3847
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    Genomic context

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    Sequence:
    NC_000913.3 (4040517..4040636)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA-Ala Neighboring gene 23S ribosomal RNA Neighboring gene molybdopterin-guanine dinucleotide biosynthesis adaptor protein Neighboring gene molybdenum cofactor guanylyltransferase Neighboring gene DUF1040 domain-containing protein YihD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rapid in vivo exploration of a 5S rRNA neutral network. Zhang ZD, et al. J Microbiol Methods, 2009 Feb. PMID 19041908
    2. Changes in the conformation of 5S rRNA cause alterations in principal functions of the ribosomal nanomachine. Kouvela EC, et al. Nucleic Acids Res, 2007. PMID 17652323, Free PMC Article
    3. Facilitating RNA structure prediction with microarrays. Kierzek E, et al. Biochemistry, 2006 Jan 17. PMID 16401087, Free PMC Article
    4. Improvement of RNA secondary structure prediction using RNase H cleavage and randomized oligonucleotides. Kauffmann AD, et al. Nucleic Acids Res, 2009 Oct. PMID 19596816, Free PMC Article
    5. Physical map of the seven ribosomal RNA genes of Escherichia coli. Boros I, et al. Nucleic Acids Res, 1979. PMID 377232, Free PMC Article

    See all (24) citations in PubMed

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