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    yihD DUF1040 domain-containing protein YihD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948348, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yihD
    Official Full Name
    DUF1040 domain-containing protein YihD
    Primary source
    ECOCYC:EG11830
    Locus tag
    b3858
    See related
    ASAP:ABE-0012599
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3850
    Summary
    YihD protein has been detected . [More information is available at EcoCyc: EG11830].
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    Genomic context

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    Sequence:
    NC_000913.3 (4042069..4042338)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene molybdopterin-guanine dinucleotide biosynthesis adaptor protein Neighboring gene molybdenum cofactor guanylyltransferase Neighboring gene stress response kinase A Neighboring gene thiol:disulfide oxidoreductase DsbA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    2. Small genes/gene-products in Escherichia coli K-12. Wasinger VC, et al. FEMS Microbiol Lett, 1998 Dec 15. PMID 9868784
    3. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Lu P, et al. Nat Biotechnol, 2007 Jan. PMID 17187058
    4. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    5. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Small genes/gene-products in Escherichia coli K-12.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF1040 domain-containing protein YihD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4042069..4042338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418295.1 DUF1040 domain-containing protein YihD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418295.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A192CFV9, A0A1X3HZ34, A0A1X3IUB9, A0A1X3JA36, A0AA36L2B3, A0AAJ3TZ40, F4T682, Q1R457
      Conserved Domains (1) summary
      pfam06288
      Location:1 → 86
      DUF1040; Protein of unknown function (DUF1040)
    Nucleotide Protein
    Heading Accession and Version

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