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    LOC728488 POM121 membrane glycoprotein (rat) pseudogene [ Homo sapiens (human) ]

    Gene ID: 728488, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC728488
    Gene description
    POM121 membrane glycoprotein (rat) pseudogene
    See related
    Ensembl:ENSG00000250138
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC728488 in Genome Data Viewer
    Location:
    5q13.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (69631756..69636953)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (70457540..70462737)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (68927583..68932780)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene GTF2H2 family member C Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68928896-68929561 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68929562-68930228 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68930229-68930894 Neighboring gene NAIP pseudogene 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:68937559-68938060 Neighboring gene uncharacterized LOC124900997 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68958303-68958856 Neighboring gene GUSB pseudogene 3 Neighboring gene POM121 membrane glycoprotein (rat) pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69005506-69006322 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69006323-69007139 Neighboring gene NANOG hESC enhancer GRCh37_chr5:69068631-69069132 Neighboring gene uncharacterized LOC105379623 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69139757-69140580

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Clone Names

    • FLJ18669, FLJ54498

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_006089.4 

      Range
      101..5298
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      69631756..69636953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791777.1 Reference GRCh38.p14 PATCHES

      Range
      299007..304198
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NW_003315917.2 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      920687..925878 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      70457540..70462737
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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