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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001015053.2 → NP_001015053.1 histone deacetylase 5 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longer transcript and encodes the longer isoform (3).
- Source sequence(s)
-
AB011172, AC023855, BC051824, CN290533
- Consensus CDS
-
CCDS32663.1
- UniProtKB/Swiss-Prot
-
Q9UQL6
- Related
- ENSP00000225983.5, ENST00000225983.10
- Conserved Domains (2) summary
-
- cd10164
Location:69 → 165
- ClassIIa_HDAC5_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC5, a Class IIa histone deacetylase
- cd10007
Location:680 → 1096
- HDAC5; Histone deacetylase 5
-
NM_001382393.1 → NP_001369322.1 histone deacetylase 5 isoform 1
Status: REVIEWED
- Source sequence(s)
-
AB011172, AC023855, BC051824
- Consensus CDS
-
CCDS45696.1
- UniProtKB/Swiss-Prot
- C9JFV9, O60340, O60528, Q96DY4, Q9UQL6
- Related
- ENSP00000468004.1, ENST00000586802.5
- Conserved Domains (2) summary
-
- cd10164
Location:68 → 164
- ClassIIa_HDAC5_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC5, a Class IIa histone deacetylase
- cd10007
Location:679 → 1095
- HDAC5; Histone deacetylase 5
-
NM_005474.5 → NP_005465.2 histone deacetylase 5 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) uses an alternate in-frame splice site compared to variant 3. The resulting isoform (1) has the same N- and C-termini but is 1 aa shorter compared to isoform 3.
- Source sequence(s)
-
AB011172, AC023855, BC051824, BM564861
- Consensus CDS
-
CCDS45696.1
- UniProtKB/Swiss-Prot
- C9JFV9, O60340, O60528, Q96DY4, Q9UQL6
- Related
- ENSP00000507606.1, ENST00000682912.1
- Conserved Domains (2) summary
-
- cd10164
Location:68 → 164
- ClassIIa_HDAC5_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC5, a Class IIa histone deacetylase
- cd10007
Location:679 → 1095
- HDAC5; Histone deacetylase 5
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_139205.1: Suppressed sequence
- Description
- NM_139205.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.