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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086039.1 Reference GRCr8
- Range
-
12261633..12399780 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039099861.2 → XP_038955789.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
- Conserved Domains (3) summary
-
- cd02659
Location:1560 → 1963
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2102 → 2481
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:905 → 969
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_063280116.1 → XP_063136186.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
-
XM_039099860.2 → XP_038955788.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
- Conserved Domains (3) summary
-
- cd02659
Location:1560 → 1963
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2102 → 2481
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:905 → 969
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_063280115.1 → XP_063136185.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
-
XM_063280114.1 → XP_063136184.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
-
XM_039099865.2 → XP_038955793.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
- Conserved Domains (3) summary
-
- cd02659
Location:1555 → 1958
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2097 → 2476
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:900 → 964
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_039099863.2 → XP_038955791.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
- Conserved Domains (3) summary
-
- cd02659
Location:1555 → 1958
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2097 → 2476
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:900 → 964
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_039099864.2 → XP_038955792.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X3
- Related
- ENSRNOP00000072190.2, ENSRNOT00000080651.3
- Conserved Domains (3) summary
-
- cd02659
Location:1560 → 1963
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2102 → 2481
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:905 → 969
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_039099859.2 → XP_038955787.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
- Conserved Domains (3) summary
-
- cd02659
Location:1560 → 1963
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2102 → 2481
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:905 → 969
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_039099862.2 → XP_038955790.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
- Conserved Domains (3) summary
-
- cd02659
Location:1560 → 1963
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2102 → 2481
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:905 → 969
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_039099867.1 → XP_038955795.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4
- UniProtKB/TrEMBL
- A6JZY9, D3ZC84
- Conserved Domains (3) summary
-
- cd02659
Location:1555 → 1958
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam12030
Location:2097 → 2476
- DUF3517; Domain of unknown function (DUF3517)
- cl28922
Location:900 → 964
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001135893.1: Suppressed sequence
- Description
- NM_001135893.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.