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    ABHD17AP5 ABHD17A pseudogene 5 [ Homo sapiens (human) ]

    Gene ID: 91219, updated on 10-Dec-2024

    Summary

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    Official Symbol
    ABHD17AP5provided by HGNC
    Official Full Name
    ABHD17A pseudogene 5provided by HGNC
    Primary source
    HGNC:HGNC:34043
    See related
    AllianceGenome:HGNC:34043
    Gene type
    pseudo
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FAM108A6; FAM108A6P
    Summary
    This locus is a pseudogene in the FAM108 family, and lies in the immunoglobulin lambda gene cluster on chromosome 22q11.21. [provided by RefSeq, Jun 2010]
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    Genomic context

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    See ABHD17AP5 in Genome Data Viewer
    Location:
    22q11.22
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (22117481..22118005, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (22531027..22531551, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (22471874..22472374, complement)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene NAD kinase 2, mitochondrial pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18720 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13522 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:22482353-22482868 Neighboring gene immunoglobulin lambda locus Neighboring gene immunoglobulin lambda variable 8-61 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:22510059-22510201 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18721 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:22518113-22518300 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18722 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18723 Neighboring gene immunoglobulin lambda variable 4-60 Neighboring gene suppressor of cytokine signaling 2 pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. One-megabase sequence analysis of the human immunoglobulin lambda gene locus. Kawasaki K, et al. Genome Res, 1997 Mar. PMID 9074928
    2. The DNA sequence of human chromosome 22. Dunham I, et al. Nature, 1999 Dec 2. PMID 10591208

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Other Names

    • abhydrolase domain containing 17A pseudogene 5
    • family with sequence similarity 108, member A1 pseudogene
    • family with sequence similarity 108, member A6, pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_000002.1 

      Range
      95863..96363 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      22117481..22118005 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      22531027..22531551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_080924.1: Suppressed sequence

      Description
      NM_080924.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.
    Nucleotide Protein
    Heading Accession and Version

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