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    lncRNA:CR43461 long non-coding RNA:CR43461 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12797940, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR43461provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43461provided by FlyBase
    Primary source
    FLYBASE:FBgn0263415
    Locus tag
    Dmel_CR43461
    See related
    AllianceGenome:FB:FBgn0263415
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43461; Dmel\CR43461
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    Genomic context

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    See lncRNA:CR43461 in Genome Data Viewer
    Location:
    6C10-6C10; 1-18 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6732717..6735917)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6626750..6629950)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribosomal protein L17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Modelling TDP-43 proteinopathy in Drosophila uncovers shared and neuron-specific targets across ALS and FTD relevant circuits. Godfrey RK, et al. Acta Neuropathol Commun, 2023 Oct 20. PMID 37864255, Free PMC Article
    2. Stem Cell-Intrinsic, Seven-up-Triggered Temporal Factor Gradients Diversify Intermediate Neural Progenitors. Ren Q, et al. Curr Biol, 2017 May 8. PMID 28434858
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43461-RA; Dmel\lncRNA:CR43461-RA; CR43461-RA; Dmel\CR43461-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6732717..6735917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_047772.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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