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    maca maca [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41892, updated on 9-Dec-2024

    Summary

    Official Symbol
    macaprovided by FlyBase
    Official Full Name
    macaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038345
    Locus tag
    Dmel_CG5213
    See related
    AllianceGenome:FB:FBgn0038345
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    cg5213; CG5213; Dmel\CG5213; Maca
    Summary
    Predicted to enable RNA binding activity. Involved in positive regulation of gene expression. Located in nucleus. Colocalizes with euchromatin. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See maca in Genome Data Viewer
    Location:
    88F6-88F6; 3-57 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15494602..15495620)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11320324..11321342)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene trissin Neighboring gene obelus Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of alternative mRNA splicing, via spliceosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    colocalizes_with euchromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nuclear speck IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    maca
    Names
    CG5213-PA
    maca-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      15494602..15495620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142216.3NP_650473.1  maca [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650473.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VF55
      Related
      FBpp0082602
      Conserved Domains (2) summary
      smart00360
      Location:128202
      RRM; RNA recognition motif
      cd12375
      Location:41117
      RRM1_Hu_like; RNA recognition motif 1 in the Hu proteins family, Drosophila sex-lethal (SXL), and similar proteins