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    CG16721 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31520, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG16721provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029820
    Locus tag
    Dmel_CG16721
    See related
    AllianceGenome:FB:FBgn0029820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG16721
    Summary
    Predicted to be involved in cAMP-mediated signaling. Predicted to be located in nucleus. Is expressed in adult head and organism. Orthologous to several human genes including TCP11L1 (t-complex 11 like 1) and TCP11L2 (t-complex 11 like 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG16721 in Genome Data Viewer
    Location:
    5C6-5C6; 1-14 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (5879869..5883391)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (5773902..5777424)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene males absent on the first Neighboring gene Ubiquitin specific protease 30 Neighboring gene long non-coding RNA:CR45668 Neighboring gene Actin 5C Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of novel candidate genes leading to sex differentiation in primordial germ cells of Drosophila. Ota R, et al. Gene Expr Patterns, 2023 Jun. PMID 37142099
    2. Differences in Postmating Transcriptional Responses between Conspecific and Heterospecific Matings in Drosophila. Ahmed-Braimah YH, et al. Mol Biol Evol, 2021 Mar 9. PMID 33035303, Free PMC Article
    3. REPTOR and REPTOR-BP Regulate Organismal Metabolism and Transcription Downstream of TORC1. Tiebe M, et al. Dev Cell, 2015 May 4. PMID 25920570, Free PMC Article
    4. Genetic programs activated by proneural proteins in the developing Drosophila PNS. Reeves N, et al. Dev Cell, 2005 Mar. PMID 15737936
    5. Adaptation to Chronic Nutritional Stress Leads to Reduced Dependence on Microbiota in Drosophila melanogaster. Erkosar B, et al. mBio, 2017 Oct 24. PMID 29066546, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cAMP-mediated signaling ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG16721-PA
    CG16721-PB
    CG16721-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      5879869..5883391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132047.3 → NP_572275.1  uncharacterized protein Dmel_CG16721, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572275.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W461
      Related
      FBpp0070786
      Conserved Domains (1) summary
      pfam05794
      Location:69 → 460
      Tcp11; T-complex protein 11

    2. NM_001297984.1 → NP_001284913.1  uncharacterized protein Dmel_CG16721, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284913.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W461
      Conserved Domains (1) summary
      pfam05794
      Location:69 → 460
      Tcp11; T-complex protein 11

    3. NM_001297985.1 → NP_001284914.1  uncharacterized protein Dmel_CG16721, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284914.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W461
      Conserved Domains (1) summary
      pfam05794
      Location:69 → 460
      Tcp11; T-complex protein 11
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W461 Q9W461

    Gene LinkOut

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