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    CG8319 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41165, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG8319provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037722
    Locus tag
    Dmel_CG8319
    See related
    AllianceGenome:FB:FBgn0037722
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8319
    Summary
    Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in several structures, including embryonic/larval midgut; embryonic/larval midgut primordium; and germline cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CG8319 in Genome Data Viewer
    Location:
    85E1-85E1; 3-49 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9627321..9628676)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5453043..5454398)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene stable intronic sequence RNA CR46357 Neighboring gene antisense RNA:CR45053 Neighboring gene Calreticulin Neighboring gene Spermidine Synthase

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transcription cis-regulatory region binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG8319-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9627321..9628676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141663.4NP_649920.2  uncharacterized protein Dmel_CG8319 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649920.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHA4
      Related
      FBpp0081555
      Conserved Domains (6) summary
      COG5048
      Location:153368
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:268288
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:207227
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:322344
      zf-C2H2; Zinc finger, C2H2 type
      pfam07776
      Location:479
      zf-AD; Zinc-finger associated domain (zf-AD)
      pfam13465
      Location:308332
      zf-H2C2_2; Zinc-finger double domain