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    CAPRIN2 caprin family member 2 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102137726, updated on 3-Dec-2024

    Summary

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    Gene symbol
    CAPRIN2
    Gene description
    caprin family member 2
    See related
    Ensembl:ENSMFAG00000025167
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CAPRIN2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 11 NC_088385.1 (33499812..33545416, complement)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 11 NC_052265.1 (30774993..30820673, complement)

    Chromosome 11 - NC_088385.1Genomic Context describing neighboring genes Neighboring gene guided entry of tail-anchored proteins factor 1-like Neighboring gene importin 8 Neighboring gene uncharacterized LOC135966199 Neighboring gene uncharacterized LOC107126666 Neighboring gene non-histone chromosomal protein HMG-17-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    caprin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088385.1 Reference T2T-MFA8v1.0

      Range
      33499812..33545416 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_065523979.1 → XP_065380051.1  caprin-2 isoform X39

    2. XM_065523978.1 → XP_065380050.1  caprin-2 isoform X38

    3. XM_065523977.1 → XP_065380049.1  caprin-2 isoform X37

    4. XM_065523976.1 → XP_065380048.1  caprin-2 isoform X35

    5. XM_045364975.2 → XP_045220910.1  caprin-2 isoform X36

      UniProtKB/TrEMBL
      A0A7N9CM25

    6. XM_045364960.2 → XP_045220895.1  caprin-2 isoform X17

      UniProtKB/TrEMBL
      A0A2K5UJU5

    7. XM_045364959.2 → XP_045220894.1  caprin-2 isoform X16

      UniProtKB/TrEMBL
      A0A2K5UJU5

    8. XM_045364973.2 → XP_045220908.1  caprin-2 isoform X33

      UniProtKB/TrEMBL
      A0A7N9CM25

    9. XM_045364970.2 → XP_045220905.1  caprin-2 isoform X29

      UniProtKB/TrEMBL
      A0A7N9CM25

    10. XM_045364954.2 → XP_045220889.1  caprin-2 isoform X12

      UniProtKB/TrEMBL
      A0A2K5UJU5

    11. XM_045364952.2 → XP_045220887.1  caprin-2 isoform X11

      UniProtKB/TrEMBL
      A0A2K5UJU5
      Conserved Domains (4) summary
      PTZ00121
      Location:49 → 488
      PTZ00121; MAEBL; Provisional
      pfam00386
      Location:883 → 1008
      C1q; C1q domain
      pfam12287
      Location:539 → 819
      Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
      pfam18293
      Location:119 → 234
      Caprin-1_dimer; Caprin-1 dimerization domain

    12. XM_045364948.2 → XP_045220883.1  caprin-2 isoform X8

      UniProtKB/TrEMBL
      A0A2K5UJU5

    13. XM_045364968.2 → XP_045220903.1  caprin-2 isoform X27

      UniProtKB/TrEMBL
      A0A7N9CM25

    14. XM_045364944.2 → XP_045220879.1  caprin-2 isoform X5

      UniProtKB/TrEMBL
      A0A2K5UJU5

    15. XM_045364964.2 → XP_045220899.1  caprin-2 isoform X24

      UniProtKB/TrEMBL
      A0A7N9CM25

    16. XM_045364942.2 → XP_045220877.1  caprin-2 isoform X4

      UniProtKB/TrEMBL
      A0A2K5UJU5
      Conserved Domains (4) summary
      PTZ00121
      Location:49 → 488
      PTZ00121; MAEBL; Provisional
      pfam00386
      Location:918 → 1043
      C1q; C1q domain
      pfam12287
      Location:539 → 854
      Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
      pfam18293
      Location:119 → 234
      Caprin-1_dimer; Caprin-1 dimerization domain

    17. XM_045364962.2 → XP_045220897.1  caprin-2 isoform X23

      UniProtKB/TrEMBL
      A0A7N9CM25

    18. XM_045364939.2 → XP_045220874.1  caprin-2 isoform X1

      UniProtKB/TrEMBL
      A0A2K5UJU5
      Conserved Domains (4) summary
      PTZ00121
      Location:74 → 513
      PTZ00121; MAEBL; Provisional
      pfam00386
      Location:943 → 1068
      C1q; C1q domain
      pfam12287
      Location:564 → 879
      Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
      pfam18293
      Location:144 → 259
      Caprin-1_dimer; Caprin-1 dimerization domain

    19. XM_065523975.1 → XP_065380047.1  caprin-2 isoform X35

    20. XM_065523974.1 → XP_065380046.1  caprin-2 isoform X34

    21. XM_045364958.2 → XP_045220893.1  caprin-2 isoform X16

      UniProtKB/TrEMBL
      A0A2K5UJU5

    22. XM_045364955.2 → XP_045220890.1  caprin-2 isoform X13

      UniProtKB/TrEMBL
      A0A2K5UJU5

    23. XM_045364953.2 → XP_045220888.1  caprin-2 isoform X12

      UniProtKB/TrEMBL
      A0A2K5UJU5

    24. XM_045364951.2 → XP_045220886.1  caprin-2 isoform X11

      UniProtKB/TrEMBL
      A0A2K5UJU5
      Conserved Domains (4) summary
      PTZ00121
      Location:49 → 488
      PTZ00121; MAEBL; Provisional
      pfam00386
      Location:883 → 1008
      C1q; C1q domain
      pfam12287
      Location:539 → 819
      Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
      pfam18293
      Location:119 → 234
      Caprin-1_dimer; Caprin-1 dimerization domain

    25. XM_045364946.2 → XP_045220881.1  caprin-2 isoform X8

      UniProtKB/TrEMBL
      A0A2K5UJU5

    26. XM_045364966.2 → XP_045220901.1  caprin-2 isoform X27

      UniProtKB/TrEMBL
      A0A7N9CM25

    27. XM_045364943.2 → XP_045220878.1  caprin-2 isoform X5

      UniProtKB/TrEMBL
      A0A2K5UJU5

    28. XM_045364963.2 → XP_045220898.1  caprin-2 isoform X24

      UniProtKB/TrEMBL
      A0A7N9CM25

    29. XM_005570479.4 → XP_005570536.1  caprin-2 isoform X4

      See identical proteins and their annotated locations for XP_005570536.1

      UniProtKB/TrEMBL
      A0A2K5UJU5
      Conserved Domains (4) summary
      PTZ00121
      Location:49 → 488
      PTZ00121; MAEBL; Provisional
      pfam00386
      Location:918 → 1043
      C1q; C1q domain
      pfam12287
      Location:539 → 854
      Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
      pfam18293
      Location:119 → 234
      Caprin-1_dimer; Caprin-1 dimerization domain

    30. XM_045364961.2 → XP_045220896.1  caprin-2 isoform X23

      UniProtKB/TrEMBL
      A0A7N9CM25

    31. XM_015430582.3 → XP_015286068.1  caprin-2 isoform X1

      UniProtKB/TrEMBL
      A0A2K5UJU5
      Related
      ENSMFAP00000012678.1
      Conserved Domains (4) summary
      PTZ00121
      Location:74 → 513
      PTZ00121; MAEBL; Provisional
      pfam00386
      Location:943 → 1068
      C1q; C1q domain
      pfam12287
      Location:564 → 879
      Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
      pfam18293
      Location:144 → 259
      Caprin-1_dimer; Caprin-1 dimerization domain

    32. XM_065523962.1 → XP_065380034.1  caprin-2 isoform X15

      UniProtKB/TrEMBL
      A0A2K5UJU5

    33. XM_065523961.1 → XP_065380033.1  caprin-2 isoform X14

      UniProtKB/TrEMBL
      A0A2K5UJU5

    34. XM_065523959.1 → XP_065380031.1  caprin-2 isoform X10

      UniProtKB/TrEMBL
      A0A2K5UJU5

    35. XM_065523957.1 → XP_065380029.1  caprin-2 isoform X7

      UniProtKB/TrEMBL
      A0A2K5UJU5

    36. XM_065523956.1 → XP_065380028.1  caprin-2 isoform X6

      UniProtKB/TrEMBL
      A0A2K5UJU5

    37. XM_065523958.1 → XP_065380030.1  caprin-2 isoform X9

      UniProtKB/TrEMBL
      A0A2K5UJU5

    38. XM_065523955.1 → XP_065380027.1  caprin-2 isoform X3

      UniProtKB/TrEMBL
      A0A2K5UJU5

    39. XM_065523954.1 → XP_065380026.1  caprin-2 isoform X2

      UniProtKB/TrEMBL
      A0A2K5UJU5

    40. XM_005570481.4 → XP_005570538.2  caprin-2 isoform X25

      UniProtKB/TrEMBL
      A0A2K5UJU5

    41. XM_065523973.1 → XP_065380045.1  caprin-2 isoform X32

      UniProtKB/TrEMBL
      A0A7N9CM25

    42. XM_065523971.1 → XP_065380043.1  caprin-2 isoform X30

      UniProtKB/TrEMBL
      A0A7N9CM25

    43. XM_065523970.1 → XP_065380042.1  caprin-2 isoform X28

      UniProtKB/TrEMBL
      A0A7N9CM25

    44. XM_065523969.1 → XP_065380041.1  caprin-2 isoform X26

      UniProtKB/TrEMBL
      A0A7N9CM25

    45. XM_065523968.1 → XP_065380040.1  caprin-2 isoform X22

      UniProtKB/TrEMBL
      A0A7N9CM25

    46. XM_065523966.1 → XP_065380038.1  caprin-2 isoform X20

      UniProtKB/TrEMBL
      A0A7N9CM25

    47. XM_065523964.1 → XP_065380036.1  caprin-2 isoform X18

      UniProtKB/TrEMBL
      A0A7N9CM25

    48. XM_065523965.1 → XP_065380037.1  caprin-2 isoform X19

      UniProtKB/TrEMBL
      A0A7N9CM25

    49. XM_065523972.1 → XP_065380044.1  caprin-2 isoform X31

      UniProtKB/TrEMBL
      A0A7N9CM25

    50. XM_065523967.1 → XP_065380039.1  caprin-2 isoform X21

      UniProtKB/TrEMBL
      A0A7N9CM25
    Nucleotide Protein
    Heading Accession and Version

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