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    CG13376 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3346142, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13376provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029518
    Locus tag
    Dmel_CG13376
    See related
    AllianceGenome:FB:FBgn0029518
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13376
    Orthologs
    all
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    Genomic context

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    See CG13376 in Genome Data Viewer
    Location:
    1A1-1A1; 1-0 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (265724..267028, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (159757..161061, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR43906 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene cinnamon Neighboring gene erect wing Neighboring gene mir-980 stem loop Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An analysis of genetic changes during the divergence of Drosophila species. Sousa-Neves R, et al. PLoS One, 2010 May 5. PMID 20463966, Free PMC Article
    2. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    3. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    4. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    5. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13376-PB
    CG13376-PC
    CG13376-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      265724..267028 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272161.1 → NP_001259090.1  uncharacterized protein Dmel_CG13376, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259090.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PIM6

    2. NM_001272162.1 → NP_001259091.1  uncharacterized protein Dmel_CG13376, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259091.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDD8, Q6IIW5

    3. NM_001014706.2 → NP_001014706.2  uncharacterized protein Dmel_CG13376, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014706.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59E78, Q6IIW5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PDD8 M9PDD8
    M9PIM6 M9PIM6
    Q59E78 Q59E78

    Gene LinkOut

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