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    Unc50 Unc50 RNA binding protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41029, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Unc50provided by FlyBase
    Official Full Name
    Unc50 RNA binding proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037609
    Locus tag
    Dmel_CG9773
    See related
    AllianceGenome:FB:FBgn0037609
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9773; Dmel\CG9773; DmUNC-50
    Summary
    Predicted to be involved in vesicle-mediated transport. Predicted to be active in Golgi membrane. Is expressed in organism. Orthologous to human UNC50 (unc-50 inner nuclear membrane RNA binding protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Unc50 in Genome Data Viewer
    Location:
    85A5-85A5; 3-48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8675283..8676613, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4501005..4502335, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene pink Neighboring gene transfer RNA:Tyrosine-GTA 1-8 Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L19 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cofactor-enabled functional expression of fruit fly, honeybee, and bumblebee nicotinic receptors reveals picomolar neonicotinoid actions. Ihara M, et al. Proc Natl Acad Sci U S A, 2020 Jul 14. PMID 32611810, Free PMC Article
    2. Functional impact of subunit composition and compensation on Drosophila melanogaster nicotinic receptors-targets of neonicotinoids. Komori Y, et al. PLoS Genet, 2023 Feb. PMID 36795653, Free PMC Article
    3. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in Golgi membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    Unc50 RNA binding protein
    Names
    CG9773-PA
    Unc50-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      8675283..8676613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141556.5 → NP_649813.1  Unc50 RNA binding protein [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649813.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VHN5
      Related
      FBpp0081434
      Conserved Domains (1) summary
      pfam05216
      Location:49 → 269
      UNC-50; UNC-50 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VHN5.1 Q9VHN5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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