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    RHBDL3 rhomboid like 3 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102122957, updated on 3-Dec-2024

    Summary

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    Gene symbol
    RHBDL3
    Gene description
    rhomboid like 3
    See related
    Ensembl:ENSMFAG00000041020
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RHBDL3 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 16 NC_088390.1 (38654021..38714260)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 16 NC_052270.1 (50374930..50435666, complement)

    Chromosome 16 - NC_088390.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 135 Neighboring gene uncharacterized LOC102119151 Neighboring gene arginine-fifty homeobox-like Neighboring gene ras homolog family member T1 Neighboring gene small ribosomal subunit protein eS17 Neighboring gene uncharacterized LOC135967839 Neighboring gene chromosome 16 C17orf75 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhomboid-related protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088390.1 Reference T2T-MFA8v1.0

      Range
      38654021..38714260
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005583395.4 → XP_005583452.1  rhomboid-related protein 3 isoform X1

      See identical proteins and their annotated locations for XP_005583452.1

      UniProtKB/TrEMBL
      A0A2K5U5G2, G7PU11
      Related
      ENSMFAP00000007604.1
      Conserved Domains (2) summary
      cl25352
      Location:38 → 99
      EFh_PEF; The penta-EF hand (PEF) family
      pfam01694
      Location:205 → 359
      Rhomboid; Rhomboid family

    2. XM_005583396.4 → XP_005583453.1  rhomboid-related protein 3 isoform X2

      See identical proteins and their annotated locations for XP_005583453.1

      UniProtKB/TrEMBL
      A0A2K5U5J8, G7PU11
      Related
      ENSMFAP00000007608.1
      Conserved Domains (2) summary
      COG5126
      Location:38 → 91
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      pfam01694
      Location:199 → 351
      Rhomboid; Rhomboid family

    3. XM_065532342.1 → XP_065388414.1  rhomboid-related protein 3 isoform X4

    4. XM_045375161.2 → XP_045231096.1  rhomboid-related protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A7N9CG60

    5. XM_065532343.1 → XP_065388415.1  rhomboid-related protein 3 isoform X5

    6. XM_065532344.1 → XP_065388416.1  rhomboid-related protein 3 isoform X6

    Nucleotide Protein
    Heading Accession and Version

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