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    SST somatostatin [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102116839, updated on 7-Jun-2024

    Summary

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    Gene symbol
    SST
    Gene description
    somatostatin
    See related
    Ensembl:ENSMFAG00000043924
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SST in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 2 NC_088376.1 (10846673..10848140)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 2 NC_052256.1 (183957457..183958922, complement)

    Chromosome 2 - NC_088376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102115065 Neighboring gene BCL6 transcription repressor Neighboring gene receptor transporter protein 2 Neighboring gene uncharacterized LOC135969484 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phenol emulsion-enhanced DNA-driven subtractive cDNA cloning: isolation of low-abundance monkey cortex-specific mRNAs. Travis GH, et al. Proc Natl Acad Sci U S A, 1988 Mar. PMID 2894033, Free PMC Article
    2. Somatostatin Gene and Protein Expression in the Non-human Primate Central Extended Amygdala. Kovner R, et al. Neuroscience, 2019 Feb 21. PMID 30610938, Free PMC Article
    3. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    somatostatin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088376.1 Reference T2T-MFA8v1.0

      Range
      10846673..10848140
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005545442.3 → XP_005545499.1  somatostatin

      See identical proteins and their annotated locations for XP_005545499.1

      UniProtKB/TrEMBL
      A0A2K5VJ08, A0A8J8Y0N9, G7NYN8
      Related
      ENSMFAP00000024737.1
      Conserved Domains (1) summary
      pfam03002
      Location:99 → 116
      Somatostatin; Somatostatin/Cortistatin family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P61279.1 GenPept UniProtKB/Swiss-Prot:P61279

    Gene LinkOut

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