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    SLC8A1 solute carrier family 8 member A1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574193, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC8A1provided by VGNC
    Official Full Name
    solute carrier family 8 member A1provided by VGNC
    Primary source
    VGNC:VGNC:77634
    See related
    Ensembl:ENSMMUG00000015508
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    NCX1
    Orthologs
    human mouse all
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    Genomic context

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    See SLC8A1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (68262034..68754523)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (40678695..41179152, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene L-lactate dehydrogenase A chain-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene uncharacterized LOC106992911 Neighboring gene uncharacterized LOC106992912 Neighboring gene uncharacterized LOC106992913

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A circularized sodium-calcium exchanger exon 2 transcript. Li XF, et al. J Biol Chem, 1999 Mar 19. PMID 10075718
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium:sodium antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/calcium exchanger 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001032861.1 → NP_001028033.1  sodium/calcium exchanger 1 precursor

      See identical proteins and their annotated locations for NP_001028033.1

      Status: PROVISIONAL

      Source sequence(s)
      AF107593
      UniProtKB/TrEMBL
      F6RXM4, F6S4E7, O97801
      Related
      ENSMMUP00000020353.4, ENSMMUT00000021757.4
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 934
      caca; sodium/calcium exchanger 1

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      68262034..68754523
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112204.2 → XP_014967690.1  sodium/calcium exchanger 1 isoform X12

      UniProtKB/TrEMBL
      F6RXM4, F6S4E7, O97801
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 934
      caca; sodium/calcium exchanger 1

    2. XM_015112192.2 → XP_014967678.1  sodium/calcium exchanger 1 isoform X1

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 970
      caca; sodium/calcium exchanger 1

    3. XM_015112211.2 → XP_014967697.1  sodium/calcium exchanger 1 isoform X1

      UniProtKB/TrEMBL
      F6S4E7
      Related
      ENSMMUP00000020349.4, ENSMMUT00000021753.4
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 970
      caca; sodium/calcium exchanger 1

    4. XM_015112194.2 → XP_014967680.1  sodium/calcium exchanger 1 isoform X1

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 970
      caca; sodium/calcium exchanger 1

    5. XM_015112210.2 → XP_014967696.1  sodium/calcium exchanger 1 isoform X1

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 970
      caca; sodium/calcium exchanger 1

    6. XM_028831408.1 → XP_028687241.1  sodium/calcium exchanger 1 isoform X9

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 942
      caca; sodium/calcium exchanger 1

    7. XM_028831405.1 → XP_028687238.1  sodium/calcium exchanger 1 isoform X7

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 958
      caca; sodium/calcium exchanger 1

    8. XM_028831413.1 → XP_028687246.1  sodium/calcium exchanger 1 isoform X11

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 935
      caca; sodium/calcium exchanger 1

    9. XM_028831412.1 → XP_028687245.1  sodium/calcium exchanger 1 isoform X10

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 941
      caca; sodium/calcium exchanger 1

    10. XM_028831407.1 → XP_028687240.1  sodium/calcium exchanger 1 isoform X8

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 957
      caca; sodium/calcium exchanger 1

    11. XM_015112205.2 → XP_014967691.1  sodium/calcium exchanger 1 isoform X12

      UniProtKB/TrEMBL
      F6RXM4, F6S4E7, O97801
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 934
      caca; sodium/calcium exchanger 1

    12. XM_028831410.1 → XP_028687243.1  sodium/calcium exchanger 1 isoform X9

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 942
      caca; sodium/calcium exchanger 1

    13. XM_028831414.1 → XP_028687247.1  sodium/calcium exchanger 1 isoform X11

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 935
      caca; sodium/calcium exchanger 1

    14. XM_015112208.2 → XP_014967694.1  sodium/calcium exchanger 1 isoform X6

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 962
      caca; sodium/calcium exchanger 1

    15. XM_015112193.2 → XP_014967679.1  sodium/calcium exchanger 1 isoform X1

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 970
      caca; sodium/calcium exchanger 1

    16. XM_028831401.1 → XP_028687234.1  sodium/calcium exchanger 1 isoform X3

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 965
      caca; sodium/calcium exchanger 1

    17. XM_028831403.1 → XP_028687236.1  sodium/calcium exchanger 1 isoform X5

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 963
      caca; sodium/calcium exchanger 1

    18. XM_028831400.1 → XP_028687233.1  sodium/calcium exchanger 1 isoform X2

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 969
      caca; sodium/calcium exchanger 1

    19. XM_028831402.1 → XP_028687235.1  sodium/calcium exchanger 1 isoform X4

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 964
      caca; sodium/calcium exchanger 1

    20. XM_028831404.1 → XP_028687237.1  sodium/calcium exchanger 1 isoform X6

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 962
      caca; sodium/calcium exchanger 1

    21. XM_028831416.1 → XP_028687249.1  sodium/calcium exchanger 1 isoform X10

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 941
      caca; sodium/calcium exchanger 1

    22. XM_015112209.2 → XP_014967695.1  sodium/calcium exchanger 1 isoform X8

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 957
      caca; sodium/calcium exchanger 1

    23. XM_015112212.2 → XP_014967698.1  sodium/calcium exchanger 1 isoform X12

      UniProtKB/TrEMBL
      F6RXM4, F6S4E7, O97801
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 934
      caca; sodium/calcium exchanger 1

    24. XM_015112206.2 → XP_014967692.1  sodium/calcium exchanger 1 isoform X1

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 970
      caca; sodium/calcium exchanger 1

    25. XM_015112207.2 → XP_014967693.1  sodium/calcium exchanger 1 isoform X3

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 965
      caca; sodium/calcium exchanger 1

    26. XM_028831415.1 → XP_028687248.1  sodium/calcium exchanger 1 isoform X7

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 958
      caca; sodium/calcium exchanger 1

    27. XM_028831411.1 → XP_028687244.1  sodium/calcium exchanger 1 isoform X9

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 942
      caca; sodium/calcium exchanger 1

    28. XM_028831406.1 → XP_028687239.1  sodium/calcium exchanger 1 isoform X7

      UniProtKB/TrEMBL
      F6S4E7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 958
      caca; sodium/calcium exchanger 1
    Nucleotide Protein
    Heading Accession and Version

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