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    BBS9 Bardet-Biedl syndrome 9 [ Gallus gallus (chicken) ]

    Gene ID: 420745, updated on 3-Dec-2024

    Summary

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    Symbol
    BBS9provided by CGNC
    Full Name
    Bardet-Biedl syndrome 9provided by CGNC
    Primary source
    CGNC:9252
    See related
    Ensembl:ENSGALG00010019256
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See BBS9 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (47584654..47889198, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (47631762..47936162, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene FANCD2 opposite strand Neighboring gene BMP binding endothelial regulator Neighboring gene 5'-nucleotidase, cytosolic IIIA Neighboring gene uncharacterized LOC121109546 Neighboring gene FK506 binding protein 9 Neighboring gene retinitis pigmentosa 9 (autosomal dominant)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BBSome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein PTHB1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      47584654..47889198 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690175.2 → XP_040546109.1  protein PTHB1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z3B5

    2. XM_040690177.2 → XP_040546111.1  protein PTHB1 isoform X7

      UniProtKB/TrEMBL
      A0A8V0ZAQ3

    3. XM_015281672.4 → XP_015137158.1  protein PTHB1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z978, A0A8V0ZAQ3
      Related
      ENSGALP00010027740.1, ENSGALT00010046582.1
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    4. XM_040690174.2 → XP_040546108.1  protein PTHB1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z9Y7
      Related
      ENSGALP00010027732.1, ENSGALT00010046574.1

    5. XM_025147546.3 → XP_025003314.1  protein PTHB1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z957
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    6. XM_040690179.2 → XP_040546113.1  protein PTHB1 isoform X11

      UniProtKB/TrEMBL
      A0A8V0Z957

    7. XM_025147548.3 → XP_025003316.1  protein PTHB1 isoform X9

      UniProtKB/TrEMBL
      A0A8V0Z957
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 760
      PHTB1_C; PTHB1 C-terminus

    8. XM_046938136.1 → XP_046794092.1  protein PTHB1 isoform X10

      UniProtKB/TrEMBL
      A0A8V0Z3B5
      Related
      ENSGALP00010027728.1, ENSGALT00010046569.1

    9. XM_025147547.3 → XP_025003315.1  protein PTHB1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z957
      Related
      ENSGALP00010027720.1, ENSGALT00010046559.1
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 807
      PHTB1_C; PTHB1 C-terminus

    10. XM_040690178.2 → XP_040546112.1  protein PTHB1 isoform X8

      UniProtKB/TrEMBL
      A0A8V0Z3B5

    11. XM_025147545.3 → XP_025003313.1  protein PTHB1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z957
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    12. XM_046938137.1 → XP_046794093.1  protein PTHB1 isoform X11

      UniProtKB/TrEMBL
      A0A8V0Z957

    13. XM_046938135.1 → XP_046794091.1  protein PTHB1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Z957

    14. XM_040690193.1 → XP_040546127.1  protein PTHB1 isoform X14

      UniProtKB/TrEMBL
      A0A8V0Z957

    15. XM_040690182.2 → XP_040546116.1  protein PTHB1 isoform X12

      UniProtKB/TrEMBL
      A0A8V0Z983
      Related
      ENSGALP00010027718.1, ENSGALT00010046556.1
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    16. XM_040690181.2 → XP_040546115.1  protein PTHB1 isoform X12

      UniProtKB/TrEMBL
      A0A8V0Z983
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    17. XM_040690183.2 → XP_040546117.1  protein PTHB1 isoform X13

      UniProtKB/TrEMBL
      A0A8V0Z983
      Related
      ENSGALP00010027745.1, ENSGALT00010046587.1

    RNA

    1. XR_005855929.2 RNA Sequence

    2. XR_005855930.2 RNA Sequence

    3. XR_005855928.2 RNA Sequence

    4. XR_005855931.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      47631762..47936162 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040662642.2 → XP_040518576.1  protein PTHB1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z3B5

    2. XM_040662645.2 → XP_040518579.1  protein PTHB1 isoform X7

      UniProtKB/TrEMBL
      A0A8V0ZAQ3

    3. XM_040662643.2 → XP_040518577.1  protein PTHB1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z978, A0A8V0ZAQ3
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    4. XM_040662641.2 → XP_040518575.1  protein PTHB1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z9Y7

    5. XM_040662639.2 → XP_040518573.1  protein PTHB1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z957
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    6. XM_040662648.2 → XP_040518582.1  protein PTHB1 isoform X11

      UniProtKB/TrEMBL
      A0A8V0Z957

    7. XM_040662647.2 → XP_040518581.1  protein PTHB1 isoform X9

      UniProtKB/TrEMBL
      A0A8V0Z957
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 760
      PHTB1_C; PTHB1 C-terminus

    8. XM_046912536.1 → XP_046768492.1  protein PTHB1 isoform X10

      UniProtKB/TrEMBL
      A0A8V0Z3B5

    9. XM_040662640.2 → XP_040518574.1  protein PTHB1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z957
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 807
      PHTB1_C; PTHB1 C-terminus

    10. XM_040662646.2 → XP_040518580.1  protein PTHB1 isoform X8

      UniProtKB/TrEMBL
      A0A8V0Z3B5

    11. XM_040662638.2 → XP_040518572.1  protein PTHB1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z957
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    12. XM_046912537.1 → XP_046768493.1  protein PTHB1 isoform X11

      UniProtKB/TrEMBL
      A0A8V0Z957

    13. XM_046912535.1 → XP_046768491.1  protein PTHB1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Z957

    14. XM_040662653.1 → XP_040518587.1  protein PTHB1 isoform X14

      UniProtKB/TrEMBL
      A0A8V0Z957

    15. XM_040662651.2 → XP_040518585.1  protein PTHB1 isoform X12

      UniProtKB/TrEMBL
      A0A8V0Z983
      Conserved Domains (2) summary
      pfam14727
      Location:1 → 416
      PHTB1_N; PTHB1 N-terminus
      pfam14728
      Location:439 → 812
      PHTB1_C; PTHB1 C-terminus

    16. XM_040662652.2 → XP_040518586.1  protein PTHB1 isoform X13

      UniProtKB/TrEMBL
      A0A8V0Z983

    RNA

    1. XR_005846054.2 RNA Sequence

    2. XR_005846055.2 RNA Sequence

    3. XR_005846053.2 RNA Sequence

    4. XR_005846057.2 RNA Sequence

    5. XR_005846056.2 RNA Sequence

    6. XR_005846058.2 RNA Sequence

    Nucleotide Protein
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