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    C2orf40 C2orf40 homolog [ Gallus gallus (chicken) ]

    Gene ID: 771055, updated on 17-Aug-2024

    Summary

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    Official Symbol
    C2orf40provided by CGNC
    Official Full Name
    C2orf40 homologprovided by CGNC
    Primary source
    CGNC:12602
    See related
    Ensembl:ENSGALG00010012967
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ECRG4; C1H2ORF40
    Orthologs
    human mouse all
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    Genomic context

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    See C2orf40 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (135530606..135533702)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (135487874..135490970)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene NCK adaptor protein 1 Neighboring gene uncharacterized LOC121106671 Neighboring gene uncharacterized LOC107051985 Neighboring gene UDP-glucuronate decarboxylase 1 Neighboring gene uncharacterized LOC112531517

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in G1 to G0 transition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in anaphase-promoting complex-dependent catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular senescence IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    augurin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      135530606..135533702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004938515.5 → XP_004938572.1  augurin isoform X1

      UniProtKB/TrEMBL
      A0A8V0YJU8
      Conserved Domains (1) summary
      pfam15187
      Location:36 → 158
      Augurin; Oesophageal cancer-related gene 4

    2. XM_001234360.7 → XP_001234361.2  augurin isoform X2

      UniProtKB/TrEMBL
      A0A8K1B0E1, A0A8V0YJU8
      Related
      ENSGALP00010018105.1, ENSGALT00010031111.1
      Conserved Domains (1) summary
      pfam15187
      Location:36 → 152
      Augurin; Oesophageal cancer-related gene 4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      135487874..135490970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040658129.2 → XP_040514063.1  augurin isoform X1

      UniProtKB/TrEMBL
      A0A8V0YJU8
      Conserved Domains (1) summary
      pfam15187
      Location:36 → 158
      Augurin; Oesophageal cancer-related gene 4

    2. XM_040658130.2 → XP_040514064.1  augurin isoform X2

      UniProtKB/TrEMBL
      A0A8K1B0E1, A0A8V0YJU8
      Conserved Domains (1) summary
      pfam15187
      Location:36 → 152
      Augurin; Oesophageal cancer-related gene 4
    Nucleotide Protein Strain
    Heading Accession and Version

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