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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
Genomic
-
NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
- Range
-
7442468..7480047
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_015294511.4 → XP_015149997.2 putative E3 ubiquitin-protein ligase UNKL isoform X4
- UniProtKB/TrEMBL
- A0A1D5P5R8, A0A8V0ZEM5
- Related
- ENSGALP00010029303.1, ENSGALT00010049602.1
- Conserved Domains (4) summary
-
- COG0711
Location:617 → 687
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:736 → 770
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:1 → 36
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:734 → 771
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_025155166.3 → XP_025010934.2 putative E3 ubiquitin-protein ligase UNKL isoform X7
- Conserved Domains (4) summary
-
- smart00356
Location:100 → 126
- ZnF_C3H1; zinc finger
- COG0711
Location:455 → 525
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:574 → 608
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:572 → 609
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_015294517.4 → XP_015150003.2 putative E3 ubiquitin-protein ligase UNKL isoform X15
- Conserved Domains (4) summary
-
- smart00356
Location:124 → 150
- ZnF_C3H1; zinc finger
- COG0711
Location:479 → 549
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:598 → 632
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:596 → 633
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_025155161.3 → XP_025010929.2 putative E3 ubiquitin-protein ligase UNKL isoform X2
- UniProtKB/TrEMBL
- A0A1D5P5R8, A0A8V0ZKZ9
- Related
- ENSGALP00010029295.1, ENSGALT00010049591.1
- Conserved Domains (3) summary
-
- COG0711
Location:652 → 722
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- pfam18384
Location:38 → 71
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:769 → 806
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_046900843.1 → XP_046756799.1 putative E3 ubiquitin-protein ligase UNKL isoform X17
-
XM_040647689.2 → XP_040503623.1 putative E3 ubiquitin-protein ligase UNKL isoform X5
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (2) summary
-
- COG0711
Location:656 → 726
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- pfam18384
Location:42 → 75
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
-
XM_046900838.1 → XP_046756794.1 putative E3 ubiquitin-protein ligase UNKL isoform X6
- UniProtKB/TrEMBL
-
A0A1D5P5R8
-
XM_046900840.1 → XP_046756796.1 putative E3 ubiquitin-protein ligase UNKL isoform X10
- UniProtKB/TrEMBL
-
A0A1D5P5R8
-
XM_040647687.2 → XP_040503621.1 putative E3 ubiquitin-protein ligase UNKL isoform X1
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (4) summary
-
- COG0711
Location:656 → 726
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:775 → 809
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:42 → 75
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:773 → 810
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040647690.2 → XP_040503624.1 putative E3 ubiquitin-protein ligase UNKL isoform X8
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (4) summary
-
- COG0711
Location:579 → 649
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:698 → 732
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:42 → 75
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:696 → 733
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_046900841.1 → XP_046756797.1 putative E3 ubiquitin-protein ligase UNKL isoform X7
-
XM_040647692.2 → XP_040503626.2 putative E3 ubiquitin-protein ligase UNKL isoform X11
-
XM_046900839.1 → XP_046756795.1 putative E3 ubiquitin-protein ligase UNKL isoform X7
-
XM_046900844.1 → XP_046756800.1 putative E3 ubiquitin-protein ligase UNKL isoform X16
-
XM_015294510.4 → XP_015149996.2 putative E3 ubiquitin-protein ligase UNKL isoform X3
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Related
- ENSGALP00010029298.1, ENSGALT00010049595.1
- Conserved Domains (4) summary
-
- COG0711
Location:642 → 712
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:761 → 795
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:26 → 61
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:759 → 796
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_046900842.1 → XP_046756798.1 putative E3 ubiquitin-protein ligase UNKL isoform X7
-
XM_015294516.4 → XP_015150002.2 putative E3 ubiquitin-protein ligase UNKL isoform X13
- Conserved Domains (4) summary
-
- smart00356
Location:149 → 175
- ZnF_C3H1; zinc finger
- COG0711
Location:504 → 574
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:623 → 657
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:621 → 658
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_015294513.4 → XP_015149999.2 putative E3 ubiquitin-protein ligase UNKL isoform X9
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (3) summary
-
- COG0711
Location:572 → 642
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:691 → 725
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:689 → 726
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040647693.2 → XP_040503627.1 putative E3 ubiquitin-protein ligase UNKL isoform X14
- UniProtKB/TrEMBL
- A0A1D5P5R8, A0A8V0ZDK4
- Related
- ENSGALP00010029301.1, ENSGALT00010049599.1
- Conserved Domains (3) summary
-
- COG0711
Location:495 → 565
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:614 → 648
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:612 → 649
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_015294515.4 → XP_015150001.2 putative E3 ubiquitin-protein ligase UNKL isoform X12
- Conserved Domains (4) summary
-
- smart00356
Location:158 → 184
- ZnF_C3H1; zinc finger
- COG0711
Location:513 → 583
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:632 → 666
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:630 → 667
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_015294518.4 → XP_015150004.3 putative E3 ubiquitin-protein ligase UNKL isoform X16
-
XM_015294524.4 → XP_015150010.2 putative E3 ubiquitin-protein ligase UNKL isoform X18
- Conserved Domains (3) summary
-
- PRK11448
Location:35 → 142
- hsdR; type I restriction enzyme EcoKI subunit R; Provisional
- cd00162
Location:191 → 225
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:189 → 226
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
RNA
-
XR_005839860.2 RNA Sequence
Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
Genomic
-
NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
- Range
-
7438116..7475660
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_040683905.2 → XP_040539839.1 putative E3 ubiquitin-protein ligase UNKL isoform X4
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (4) summary
-
- COG0711
Location:617 → 687
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:736 → 770
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:1 → 36
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:734 → 771
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683915.2 → XP_040539849.1 putative E3 ubiquitin-protein ligase UNKL isoform X7
- Conserved Domains (4) summary
-
- COG0711
Location:455 → 525
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:574 → 608
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam00642
Location:100 → 126
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
- cl17238
Location:572 → 609
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683913.2 → XP_040539847.1 putative E3 ubiquitin-protein ligase UNKL isoform X15
- Conserved Domains (4) summary
-
- COG0711
Location:479 → 549
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:598 → 632
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam00642
Location:124 → 150
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
- cl17238
Location:596 → 633
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683903.2 → XP_040539837.1 putative E3 ubiquitin-protein ligase UNKL isoform X2
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (5) summary
-
- COG0711
Location:652 → 722
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:771 → 805
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:38 → 71
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- pfam00642
Location:297 → 323
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
- cl17238
Location:769 → 806
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_046927626.1 → XP_046783582.1 putative E3 ubiquitin-protein ligase UNKL isoform X17
-
XM_040683906.2 → XP_040539840.1 putative E3 ubiquitin-protein ligase UNKL isoform X5
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (2) summary
-
- COG0711
Location:656 → 726
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- pfam18384
Location:42 → 75
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
-
XM_046927621.1 → XP_046783577.1 putative E3 ubiquitin-protein ligase UNKL isoform X6
- UniProtKB/TrEMBL
-
A0A1D5P5R8
-
XM_046927623.1 → XP_046783579.1 putative E3 ubiquitin-protein ligase UNKL isoform X10
- UniProtKB/TrEMBL
-
A0A1D5P5R8
-
XM_040683902.2 → XP_040539836.1 putative E3 ubiquitin-protein ligase UNKL isoform X1
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (4) summary
-
- COG0711
Location:656 → 726
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:775 → 809
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:42 → 75
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:773 → 810
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683907.2 → XP_040539841.1 putative E3 ubiquitin-protein ligase UNKL isoform X8
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (4) summary
-
- COG0711
Location:579 → 649
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:698 → 732
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:42 → 75
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- cl17238
Location:696 → 733
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_046927624.1 → XP_046783580.1 putative E3 ubiquitin-protein ligase UNKL isoform X7
-
XM_040683909.2 → XP_040539843.2 putative E3 ubiquitin-protein ligase UNKL isoform X11
-
XM_046927622.1 → XP_046783578.1 putative E3 ubiquitin-protein ligase UNKL isoform X7
-
XM_046927627.1 → XP_046783583.1 putative E3 ubiquitin-protein ligase UNKL isoform X16
-
XM_040683904.2 → XP_040539838.1 putative E3 ubiquitin-protein ligase UNKL isoform X3
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (5) summary
-
- COG0711
Location:642 → 712
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:761 → 795
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam18384
Location:26 → 61
- zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)
- pfam00642
Location:287 → 313
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
- cl17238
Location:759 → 796
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_046927625.1 → XP_046783581.1 putative E3 ubiquitin-protein ligase UNKL isoform X7
-
XM_040683911.2 → XP_040539845.1 putative E3 ubiquitin-protein ligase UNKL isoform X13
- Conserved Domains (4) summary
-
- smart00356
Location:149 → 175
- ZnF_C3H1; zinc finger
- COG0711
Location:504 → 574
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:623 → 657
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:621 → 658
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683908.2 → XP_040539842.1 putative E3 ubiquitin-protein ligase UNKL isoform X9
- UniProtKB/TrEMBL
-
A0A1D5P5R8
- Conserved Domains (4) summary
-
- COG0711
Location:572 → 642
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:691 → 725
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- pfam00642
Location:217 → 243
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
- cl17238
Location:689 → 726
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683912.2 → XP_040539846.1 putative E3 ubiquitin-protein ligase UNKL isoform X14
- UniProtKB/TrEMBL
- A0A1D5P5R8, A0A8V0ZDK4
- Conserved Domains (3) summary
-
- COG0711
Location:495 → 565
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:614 → 648
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:612 → 649
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683910.2 → XP_040539844.1 putative E3 ubiquitin-protein ligase UNKL isoform X12
- Conserved Domains (4) summary
-
- smart00356
Location:158 → 184
- ZnF_C3H1; zinc finger
- COG0711
Location:513 → 583
- AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]
- cd00162
Location:632 → 666
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:630 → 667
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_040683914.2 → XP_040539848.2 putative E3 ubiquitin-protein ligase UNKL isoform X16
-
XM_040683917.2 → XP_040539851.1 putative E3 ubiquitin-protein ligase UNKL isoform X18
- Conserved Domains (3) summary
-
- PRK11448
Location:35 → 142
- hsdR; type I restriction enzyme EcoKI subunit R; Provisional
- cd00162
Location:191 → 225
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cl17238
Location:189 → 226
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
RNA
-
XR_005854262.2 RNA Sequence