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    ZBTB49 zinc finger and BTB domain containing 49 [ Gallus gallus (chicken) ]

    Gene ID: 422847, updated on 17-Aug-2024

    Summary

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    Symbol
    ZBTB49provided by CGNC
    Full Name
    zinc finger and BTB domain containing 49provided by CGNC
    Primary source
    CGNC:11155
    See related
    Ensembl:ENSGALG00010009190
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ZNF509
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB49 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (78047547..78083718)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (78026278..78062528)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene otopetrin 1 Neighboring gene transmembrane protein 128 Neighboring gene Ly1 antibody reactive Neighboring gene neuronal vesicle trafficking associated 1 Neighboring gene syntaxin 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 49
    Names
    zinc finger protein 509

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      78047547..78083718
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046940741.1 → XP_046796697.1  zinc finger and BTB domain-containing protein 49

      UniProtKB/TrEMBL
      A0A8V0Y0T6

    2. XM_025149805.3 → XP_025005573.2  zinc finger and BTB domain-containing protein 49

      UniProtKB/TrEMBL
      A0A8V0Y0T6
      Conserved Domains (3) summary
      COG5048
      Location:129 → 554
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:510 → 530
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18233
      Location:7 → 118
      BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)

    3. XM_004936168.5 → XP_004936225.2  zinc finger and BTB domain-containing protein 49

      UniProtKB/TrEMBL
      A0A8V0Y0T6
      Related
      ENSGALP00010012558.1, ENSGALT00010021934.1
      Conserved Domains (3) summary
      COG5048
      Location:129 → 554
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:510 → 530
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18233
      Location:7 → 118
      BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      78026278..78062528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040669640.2 → XP_040525574.1  zinc finger and BTB domain-containing protein 49

      Conserved Domains (4) summary
      COG5048
      Location:129 → 554
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:510 → 530
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18233
      Location:7 → 118
      BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)
      pfam13465
      Location:550 → 575
      zf-H2C2_2; Zinc-finger double domain

    2. XM_040669642.2 → XP_040525576.1  zinc finger and BTB domain-containing protein 49

      Conserved Domains (4) summary
      COG5048
      Location:129 → 554
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:510 → 530
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18233
      Location:7 → 118
      BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)
      pfam13465
      Location:550 → 575
      zf-H2C2_2; Zinc-finger double domain

    3. XM_046916991.1 → XP_046772947.1  zinc finger and BTB domain-containing protein 49

    4. XM_040669641.2 → XP_040525575.1  zinc finger and BTB domain-containing protein 49

      Conserved Domains (4) summary
      COG5048
      Location:129 → 554
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:510 → 530
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18233
      Location:7 → 118
      BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)
      pfam13465
      Location:550 → 575
      zf-H2C2_2; Zinc-finger double domain

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001031164.1: Suppressed sequence

      Description
      NM_001031164.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZNF509 (GeneID:166793).
    Nucleotide Protein Strain
    Heading Accession and Version

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