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    FBXL17 F-box and leucine rich repeat protein 17 [ Gallus gallus (chicken) ]

    Gene ID: 415615, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FBXL17provided by CGNC
    Official Full Name
    F-box and leucine rich repeat protein 17provided by CGNC
    Primary source
    CGNC:161
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See FBXL17 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (48360165..48650920)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (48360165..48650920)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene praja ring finger ubiquitin ligase 2 Neighboring gene fer (fps/fes related) tyrosine kinase Neighboring gene uncharacterized LOC107052341 Neighboring gene uncharacterized LOC121108297 Neighboring gene uncharacterized LOC121108476 Neighboring gene ephrin A5 Neighboring gene uncharacterized LOC121108343

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SCF ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box/LRR-repeat protein 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      48360165..48650920
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_413983.8 → XP_413983.4  F-box/LRR-repeat protein 17 isoform X1

      Conserved Domains (3) summary
      cd09293
      Location:304 → 488
      AMN1; Antagonist of mitotic exit network protein 1
      smart00256
      Location:250 → 291
      FBOX; A Receptor for Ubiquitination Targets
      sd00034
      Location:288 → 313
      LRR_AMN1; leucine-rich repeat [structural motif]

    2. XM_015280455.4 → XP_015135941.2  F-box/LRR-repeat protein 17 isoform X4

      Conserved Domains (3) summary
      cd09293
      Location:304 → 488
      AMN1; Antagonist of mitotic exit network protein 1
      smart00256
      Location:250 → 291
      FBOX; A Receptor for Ubiquitination Targets
      sd00034
      Location:288 → 313
      LRR_AMN1; leucine-rich repeat [structural motif]

    3. XM_040655861.2 → XP_040511795.1  F-box/LRR-repeat protein 17 isoform X2

      Conserved Domains (3) summary
      cd09293
      Location:304 → 488
      AMN1; Antagonist of mitotic exit network protein 1
      smart00256
      Location:250 → 291
      FBOX; A Receptor for Ubiquitination Targets
      sd00034
      Location:288 → 313
      LRR_AMN1; leucine-rich repeat [structural motif]

    4. XM_015280454.4 → XP_015135940.2  F-box/LRR-repeat protein 17 isoform X3

      Conserved Domains (3) summary
      cd09293
      Location:304 → 488
      AMN1; Antagonist of mitotic exit network protein 1
      smart00256
      Location:250 → 291
      FBOX; A Receptor for Ubiquitination Targets
      sd00034
      Location:288 → 313
      LRR_AMN1; leucine-rich repeat [structural motif]

    RNA

    1. XR_005842732.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      48360165..48650920
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046936852.1 → XP_046792808.1  F-box/LRR-repeat protein 17 isoform X1

    2. XM_046936855.1 → XP_046792811.1  F-box/LRR-repeat protein 17 isoform X4

    3. XM_046936853.1 → XP_046792809.1  F-box/LRR-repeat protein 17 isoform X2

    4. XM_046936854.1 → XP_046792810.1  F-box/LRR-repeat protein 17 isoform X3

    RNA

    1. XR_006937993.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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