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    ANAPC4 anaphase promoting complex subunit 4 [ Gallus gallus (chicken) ]

    Gene ID: 422805, updated on 17-Aug-2024

    Summary

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    Symbol
    ANAPC4provided by CGNC
    Full Name
    anaphase promoting complex subunit 4provided by CGNC
    Primary source
    CGNC:10702
    See related
    Ensembl:ENSGALG00010010933
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ANAPC4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (73004954..73022059, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (72987666..73004773, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 34 member 2 Neighboring gene uncharacterized LOC121110518 Neighboring gene zinc finger CCHC-type containing 4 Neighboring gene phosphatidylinositol 4-kinase type 2 beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anaphase-promoting complex-dependent catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of mitotic metaphase/anaphase transition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K11-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of anaphase-promoting complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear periphery IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anaphase-promoting complex subunit 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      73004954..73022059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040699297.1 → XP_040555231.1  anaphase-promoting complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y778, A0A8V0Y783
      Related
      ENSGALP00010014810.1, ENSGALT00010026186.1
      Conserved Domains (1) summary
      sd00039
      Location:55 → 90
      7WD40; WD40 repeat [structural motif]

    2. XM_015285705.4 → XP_015141191.1  anaphase-promoting complex subunit 4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y2H0
      Conserved Domains (1) summary
      pfam12896
      Location:123 → 321
      ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      72987666..73004773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040669187.1 → XP_040525121.1  anaphase-promoting complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y783
      Conserved Domains (3) summary
      sd00039
      Location:56 → 91
      7WD40; WD40 repeat [structural motif]
      pfam12894
      Location:58 → 150
      ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
      pfam12896
      Location:267 → 465
      ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

    2. XM_040669188.2 → XP_040525122.1  anaphase-promoting complex subunit 4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y2H0
      Conserved Domains (1) summary
      pfam12896
      Location:123 → 321
      ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001031156.1: Suppressed sequence

      Description
      NM_001031156.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
    Nucleotide Protein Strain
    Heading Accession and Version

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