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    LOC100857883 digestive cysteine proteinase 2-like [ Gallus gallus (chicken) ]

    Gene ID: 100857883, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC100857883provided by CGNC
    Full Name
    digestive cysteine proteinase 2-likeprovided by CGNC
    Primary source
    CGNC:65179
    See related
    Ensembl:ENSGALG00010018329
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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    Genomic context

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    See LOC100857883 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (2430064..2434846)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (2198852..2203654)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene AT-hook DNA binding motif containing 1 Neighboring gene uncharacterized LOC121107501 Neighboring gene FGR proto-oncogene, Src family tyrosine kinase Neighboring gene digestive cysteine proteinase 1-like Neighboring gene family with sequence similarity 76 member A Neighboring gene sestrin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    digestive cysteine proteinase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2430064..2434846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015297704.4 → XP_015153190.3  digestive cysteine proteinase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YZ64
      Conserved Domains (2) summary
      smart00848
      Location:161 → 216
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
      cd02248
      Location:246 → 461
      Peptidase_C1A; Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, ...

    2. XM_040651982.2 → XP_040507916.1  digestive cysteine proteinase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YZ64
      Related
      ENSGALP00010026309.1, ENSGALT00010044230.1
      Conserved Domains (2) summary
      smart00848
      Location:245 → 300
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
      cd02248
      Location:330 → 545
      Peptidase_C1A; Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2198852..2203654
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690025.2 → XP_040545959.1  digestive cysteine proteinase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YZ64
      Conserved Domains (2) summary
      smart00848
      Location:161 → 216
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
      cd02248
      Location:246 → 461
      Peptidase_C1A; Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, ...

    2. XM_040690023.2 → XP_040545957.1  digestive cysteine proteinase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YZ64
      Conserved Domains (2) summary
      smart00848
      Location:245 → 300
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
      cd02248
      Location:330 → 545
      Peptidase_C1A; Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, ...
    Nucleotide Protein
    Heading Accession and Version

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