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    TNFRSF21 TNF receptor superfamily member 21 [ Gallus gallus (chicken) ]

    Gene ID: 422062, updated on 3-Dec-2024

    Summary

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    Symbol
    TNFRSF21provided by CGNC
    Full Name
    TNF receptor superfamily member 21provided by CGNC
    Primary source
    CGNC:12534
    See related
    Ensembl:ENSGALG00010008343
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    DR6
    Orthologs
    human mouse all
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    Genomic context

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    See TNFRSF21 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (109734332..109767402, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (109498134..109531531, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110220 Neighboring gene meprin A subunit alpha Neighboring gene adhesion G protein-coupled receptor F5 Neighboring gene uncharacterized LOC101750714 Neighboring gene CD2 associated protein Neighboring gene adhesion G protein-coupled receptor F4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in humoral immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of B cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of myelination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oligodendrocyte apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 21
    Names
    death receptor 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031103.2 → NP_001026274.2  tumor necrosis factor receptor superfamily member 21 precursor

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000070
      UniProtKB/TrEMBL
      A0A8V0XXU5, Q98SM6
      Related
      ENSGALP00010011518.1, ENSGALT00010019970.1
      Conserved Domains (2) summary
      cd08778
      Location:395 → 478
      Death_TNFRSF21; Death domain of tumor necrosis factor receptor superfamily member 21
      cd10583
      Location:38 → 196
      TNFRSF21; Tumor necrosis factor receptor superfamily member 21 (TNFRSF21), also known as death receptor (DR6)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      109734332..109767402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046938986.1 → XP_046794942.1  tumor necrosis factor receptor superfamily member 21 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y672, Q98SM6
      Related
      ENSGALP00010011520.1, ENSGALT00010019972.1

    2. XM_046938987.1 → XP_046794943.1  tumor necrosis factor receptor superfamily member 21 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XZQ7

    3. XM_040697267.2 → XP_040553201.1  tumor necrosis factor receptor superfamily member 21 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XXU0, A0A8V0XZQ7
      Related
      ENSGALP00010011513.1, ENSGALT00010019965.1
      Conserved Domains (2) summary
      cd08778
      Location:400 → 483
      Death_TNFRSF21; Death domain of tumor necrosis factor receptor superfamily member 21
      cd10583
      Location:43 → 201
      TNFRSF21; Tumor necrosis factor receptor superfamily member 21 (TNFRSF21), also known as death receptor (DR6)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      109498134..109531531 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046914304.1 → XP_046770260.1  tumor necrosis factor receptor superfamily member 21 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y672, Q98SM6

    2. XM_046914305.1 → XP_046770261.1  tumor necrosis factor receptor superfamily member 21 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XZQ7

    3. XM_046914303.1 → XP_046770259.1  tumor necrosis factor receptor superfamily member 21 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XXU0, A0A8V0XZQ7
    Nucleotide Protein Strain
    Heading Accession and Version

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