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    SWAP70 switching B cell complex subunit SWAP70 [ Gallus gallus (chicken) ]

    Gene ID: 423044, updated on 3-Dec-2024

    Summary

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    Official Symbol
    SWAP70provided by CGNC
    Official Full Name
    switching B cell complex subunit SWAP70provided by CGNC
    Primary source
    CGNC:51879
    See related
    Ensembl:ENSGALG00010021127
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SWAP-70
    Orthologs
    human mouse all
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    Genomic context

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    See SWAP70 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (8948080..8981962, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (8917048..8950926, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-12278 Neighboring gene adrenomedullin Neighboring gene SET binding factor 2 Neighboring gene uncharacterized LOC107053375 Neighboring gene WEE1 G2 checkpoint kinase Neighboring gene zinc finger protein 143

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    switch-associated protein 70
    Names
    RCJMB04_8b3
    SWAP switching B-cell complex 70kDa subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031180.2 → NP_001026351.2  switch-associated protein 70

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000214
      UniProtKB/Swiss-Prot
      Q5F4B2, Q5ZL29
      UniProtKB/TrEMBL
      F1N8E4
      Related
      ENSGALP00010030361.1, ENSGALT00010051169.1
      Conserved Domains (2) summary
      COG1196
      Location:317 → 549
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd13273
      Location:204 → 313
      PH_SWAP-70; Switch-associated protein-70 Pleckstrin homology (PH) domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8948080..8981962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015286385.3 → XP_015141871.1  switch-associated protein 70 isoform X1

      UniProtKB/Swiss-Prot
      Q5F4B2, Q5ZL29
      UniProtKB/TrEMBL
      A0A8V0ZHS6
      Related
      ENSGALP00010030355.1, ENSGALT00010051164.1

    2. XM_046941608.1 → XP_046797564.1  switch-associated protein 70 isoform X2

      UniProtKB/Swiss-Prot
      Q5F4B2, Q5ZL29

    3. XM_040700829.2 → XP_040556763.1  switch-associated protein 70 isoform X3

      UniProtKB/Swiss-Prot
      Q5F4B2, Q5ZL29
      Conserved Domains (2) summary
      cd13273
      Location:129 → 238
      PH_SWAP-70; Switch-associated protein-70 Pleckstrin homology (PH) domain
      TIGR02168
      Location:257 → 474
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8917048..8950926 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046918172.1 → XP_046774128.1  switch-associated protein 70 isoform X1

      UniProtKB/Swiss-Prot
      Q5F4B2, Q5ZL29
      UniProtKB/TrEMBL
      A0A8V0ZHS6

    2. XM_046918173.1 → XP_046774129.1  switch-associated protein 70 isoform X2

      UniProtKB/Swiss-Prot
      Q5F4B2, Q5ZL29

    3. XM_046918174.1 → XP_046774130.1  switch-associated protein 70 isoform X3

      UniProtKB/Swiss-Prot
      Q5F4B2, Q5ZL29
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5F4B2.1 GenPept UniProtKB/Swiss-Prot:Q5F4B2

    Gene LinkOut

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