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    RPL27 ribosomal protein L27 [ Gallus gallus (chicken) ]

    Gene ID: 396280, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPL27provided by CGNC
    Official Full Name
    ribosomal protein L27provided by CGNC
    Primary source
    CGNC:49733
    See related
    Ensembl:ENSGALG00010022427
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RPL27 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (5097686..5099966)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (6259705..6261983)

    Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene prostaglandin E synthase 3 (cytosolic)-like Neighboring gene RUN domain containing 1 Neighboring gene interferon-induced protein 35 Neighboring gene uncharacterized LOC121106446

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ribosomal protein L27 is identical in chick and rat. Lebeau MC, et al. Nucleic Acids Res, 1991 Mar 25. PMID 1709488, Free PMC Article
    2. Proteomic studies of Syk-interacting proteins using a novel amine-specific isotope tag and GFP nanotrap. Galan JA, et al. J Am Soc Mass Spectrom, 2011 Feb. PMID 21472591, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein eL27; 60S ribosomal protein L27
    NP_990668.1
    XP_040509063.1
    XP_046789260.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205337.1 → NP_990668.1  large ribosomal subunit protein eL27

      See identical proteins and their annotated locations for NP_990668.1

      Status: PROVISIONAL

      Source sequence(s)
      X56852
      UniProtKB/Swiss-Prot
      P61355
      UniProtKB/TrEMBL
      A0A8V0ZHW4
      Related
      ENSGALP00010032922.1, ENSGALT00010054505.1
      Conserved Domains (1) summary
      cl00354
      Location:1 → 136
      KOW; an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5097686..5099966
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040653129.2 → XP_040509063.1  60S ribosomal protein L27 isoform X1

      Conserved Domains (1) summary
      cd06090
      Location:6 → 168
      KOW_RPL27; KOW motif of eukaryotic Ribosomal Protein L27

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6259705..6261983
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046933304.1 → XP_046789260.1  60S ribosomal protein L27 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P61355.2 GenPept UniProtKB/Swiss-Prot:P61355

    Gene LinkOut

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