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    VAT1 vesicle amine transport 1 [ Gallus gallus (chicken) ]

    Gene ID: 420009, updated on 3-Dec-2024

    Summary

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    Official Symbol
    VAT1provided by CGNC
    Official Full Name
    vesicle amine transport 1provided by CGNC
    Primary source
    CGNC:2031
    See related
    Ensembl:ENSGALG00010022460
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See VAT1 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (5110516..5119430, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (6272534..6281450, complement)

    Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106446 Neighboring gene interferon-induced protein 35 Neighboring gene Rho family GTPase 2 Neighboring gene BRCA1 DNA repair associated

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptic vesicle membrane protein VAT-1 homolog
    Names
    vesicle amine transport protein 1 homolog (T. californica)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5110516..5119430 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046904501.1 → XP_046760457.1  synaptic vesicle membrane protein VAT-1 homolog

      UniProtKB/TrEMBL
      A0A8V0ZQV0

    2. XM_418130.7 → XP_418130.2  synaptic vesicle membrane protein VAT-1 homolog

      UniProtKB/TrEMBL
      A0A8V0ZQV0
      Related
      ENSGALP00010033000.1, ENSGALT00010054627.1
      Conserved Domains (1) summary
      cd08275
      Location:34 → 370
      MDR3; Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6272534..6281450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046933598.1 → XP_046789554.1  synaptic vesicle membrane protein VAT-1 homolog

      UniProtKB/TrEMBL
      A0A8V0ZQV0

    2. XM_040692409.2 → XP_040548343.1  synaptic vesicle membrane protein VAT-1 homolog

      UniProtKB/TrEMBL
      A0A8V0ZQV0
      Conserved Domains (1) summary
      cd08275
      Location:34 → 370
      MDR3; Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family
    Nucleotide Protein
    Heading Accession and Version

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