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    ADAR adenosine deaminase, RNA specific [ Gallus gallus (chicken) ]

    Gene ID: 769675, updated on 17-Aug-2024

    Summary

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    Symbol
    ADARprovided by CGNC
    Full Name
    adenosine deaminase, RNA specificprovided by CGNC
    Primary source
    CGNC:14589
    See related
    Ensembl:ENSGALG00010027916
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ADAR1
    Orthologs
    human mouse all
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    Genomic context

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    See ADAR in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (1963939..1975142, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (2090048..2101253, complement)

    Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 Q1 Neighboring gene cholinergic receptor nicotinic beta 2 subunit Neighboring gene proline-rich receptor-like protein kinase PERK2 Neighboring gene potassium calcium-activated channel subfamily N member 3 Neighboring gene phosphomevalonate kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hyperediting by ADAR1 of a new herpesvirus lncRNA during the lytic phase of the oncogenic Marek's disease virus. Figueroa T, et al. J Gen Virol, 2016 Nov. PMID 27655063
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. During infections, ERL lncRNA of Gallid herpesvirus 2 appeared to be directly correlated with ADAR1 expression levels.
      Title: Hyperediting by ADAR1 of a new herpesvirus lncRNA during the lytic phase of the oncogenic Marek's disease virus.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded RNA adenosine deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA-specific adenosine deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in adenosine to inosine editing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    double-stranded RNA-specific adenosine deaminase
    Names
    RNA-specific adenosine deaminase
    XP_001232162.3
    XP_004948316.2
    XP_040546674.1
    XP_040546675.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1963939..1975142 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001232161.6 → XP_001232162.3  double-stranded RNA-specific adenosine deaminase

      UniProtKB/TrEMBL
      A0A1D6Y7R2, A0A8V1AB28
      Conserved Domains (5) summary
      smart00552
      Location:764 → 1149
      ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
      cl02659
      Location:133 → 194
      z-alpha; Adenosine deaminase z-alpha domain
      cd19913
      Location:441 → 511
      DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
      cd19914
      Location:556 → 626
      DSRM_DRADA_rpt2; second double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
      cd19915
      Location:673 → 743
      DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins

    2. XM_004948259.5 → XP_004948316.2  double-stranded RNA-specific adenosine deaminase

      UniProtKB/TrEMBL
      A0A1D6Y7R2, A0A8V1AB28
      Related
      ENSGALP00010041411.1, ENSGALT00010067668.1
      Conserved Domains (5) summary
      smart00552
      Location:764 → 1149
      ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
      cl02659
      Location:133 → 194
      z-alpha; Adenosine deaminase z-alpha domain
      cd19913
      Location:441 → 511
      DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
      cd19914
      Location:556 → 626
      DSRM_DRADA_rpt2; second double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
      cd19915
      Location:673 → 743
      DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2090048..2101253 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690740.2 → XP_040546674.1  double-stranded RNA-specific adenosine deaminase

      UniProtKB/TrEMBL
      A0A1D6Y7R2
      Conserved Domains (5) summary
      smart00552
      Location:764 → 1149
      ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
      cl02659
      Location:133 → 194
      z-alpha; Adenosine deaminase z-alpha domain
      cd19913
      Location:441 → 511
      DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
      cd19914
      Location:556 → 626
      DSRM_DRADA_rpt2; second double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
      cd19915
      Location:673 → 743
      DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins

    2. XM_040690741.2 → XP_040546675.1  double-stranded RNA-specific adenosine deaminase

      UniProtKB/TrEMBL
      A0A1D6Y7R2
      Conserved Domains (5) summary
      smart00552
      Location:764 → 1149
      ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
      cl02659
      Location:133 → 194
      z-alpha; Adenosine deaminase z-alpha domain
      cd19913
      Location:441 → 511
      DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
      cd19914
      Location:556 → 626
      DSRM_DRADA_rpt2; second double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
      cd19915
      Location:673 → 743
      DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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