U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MEP1A meprin A subunit alpha [ Gallus gallus (chicken) ]

    Gene ID: 422060, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    MEP1Aprovided by CGNC
    Full Name
    meprin A subunit alphaprovided by CGNC
    Primary source
    CGNC:12530
    See related
    Ensembl:ENSGALG00010008307
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MEP1A in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (109656103..109674927)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (109419374..109438643)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 66 Neighboring gene uncharacterized LOC121110220 Neighboring gene taste receptor, type 2, member 7 Neighboring gene adhesion G protein-coupled receptor F5 Neighboring gene TNF receptor superfamily member 21

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Non-coding RNAs revealed during identification of genes involved in chicken immune responses. Ahanda ML, et al. Immunogenetics, 2009 Jan. PMID 19009289
    2. Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens. Min W, et al. Mol Biotechnol, 2005 Jun. PMID 15920284
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    meprin A subunit alpha
    Names
    meprin A, alpha (PABA peptide hydrolase)
    NP_001264650.2
    XP_040553200.2
    XP_046770256.1
    XP_046770257.1
    XP_046770258.1
    XP_046794941.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277721.2 → NP_001264650.2  meprin A subunit alpha precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000070
      UniProtKB/TrEMBL
      A0A8V0XT72
      Related
      ENSGALP00010011413.1, ENSGALT00010019865.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      109656103..109674927
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040697266.2 → XP_040553200.2  meprin A subunit alpha isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y5U5

    2. XM_046938985.1 → XP_046794941.1  meprin A subunit alpha isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y5U5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      109419374..109438643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046914300.1 → XP_046770256.1  meprin A subunit alpha isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y5U5

    2. XM_046914301.1 → XP_046770257.1  meprin A subunit alpha isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y5U5

    3. XM_046914302.1 → XP_046770258.1  meprin A subunit alpha isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y5U5
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials