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    RAD51D RAD51 paralog D [ Gallus gallus (chicken) ]

    Gene ID: 417528, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAD51Dprovided by CGNC
    Official Full Name
    RAD51 paralog Dprovided by CGNC
    Primary source
    CGNC:1582
    See related
    Ensembl:ENSGALG00010029630
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    RAD51L3
    Orthologs
    human mouse all
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    Genomic context

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    See RAD51D in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (4960101..4964193)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (4688552..4692643)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 2 beta 1 subunit Neighboring gene Z30 small nucleolar RNA Neighboring gene unc-45 myosin chaperone B Neighboring gene ring finger and FYVE like domain containing E3 ubiquitin protein ligase Neighboring gene DNA ligase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables four-way junction DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA strand invasion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in replication fork IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA repair protein RAD51 homolog 4
    Names
    RAD51 homolog D
    RAD51-like 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001198646.2 → NP_001185575.1  DNA repair protein RAD51 homolog 4

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      A0A1D5P8Q1
      Conserved Domains (1) summary
      PRK09361
      Location:82 → 269
      radB; DNA repair and recombination protein RadB; Provisional

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4960101..4964193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040650059.2 → XP_040505993.1  DNA repair protein RAD51 homolog 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AJL8
      Related
      ENSGALP00010044333.1, ENSGALT00010071643.1
      Conserved Domains (1) summary
      TIGR02236
      Location:85 → 326
      recomb_radA; DNA repair and recombination protein RadA

    2. XM_040650060.2 → XP_040505994.1  DNA repair protein RAD51 homolog 4 isoform X2

      Conserved Domains (1) summary
      TIGR02236
      Location:85 → 294
      recomb_radA; DNA repair and recombination protein RadA

    3. XM_040650063.2 → XP_040505997.1  DNA repair protein RAD51 homolog 4 isoform X5

      Conserved Domains (1) summary
      PRK09361
      Location:203 → 242
      radB; DNA repair and recombination protein RadB; Provisional

    4. XM_015295721.4 → XP_015151207.1  DNA repair protein RAD51 homolog 4 isoform X6

      Conserved Domains (2) summary
      smart00382
      Location:99 → 234
      AAA; ATPases associated with a variety of cellular activities
      cl21455
      Location:82 → 285
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    5. XM_046902352.1 → XP_046758308.1  DNA repair protein RAD51 homolog 4 isoform X3

    6. XM_046902353.1 → XP_046758309.1  DNA repair protein RAD51 homolog 4 isoform X6

    7. XM_015295720.4 → XP_015151206.1  DNA repair protein RAD51 homolog 4 isoform X4

      Conserved Domains (2) summary
      smart00382
      Location:88 → 255
      AAA; ATPases associated with a variety of cellular activities
      cl21455
      Location:71 → 306
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4688552..4692643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046930029.1 → XP_046785985.1  DNA repair protein RAD51 homolog 4 isoform X1

    2. XM_046930030.1 → XP_046785986.1  DNA repair protein RAD51 homolog 4 isoform X2

    3. XM_046930033.1 → XP_046785989.1  DNA repair protein RAD51 homolog 4 isoform X5

    4. XM_046930034.1 → XP_046785990.1  DNA repair protein RAD51 homolog 4 isoform X6

    5. XM_046930031.1 → XP_046785987.1  DNA repair protein RAD51 homolog 4 isoform X3

    6. XM_046930035.1 → XP_046785991.1  DNA repair protein RAD51 homolog 4 isoform X6

    7. XM_046930032.1 → XP_046785988.1  DNA repair protein RAD51 homolog 4 isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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