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    LOC426385 serine/threonine kinase 35-like [ Gallus gallus (chicken) ]

    Gene ID: 426385, updated on 3-Dec-2024

    Summary

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    Symbol
    LOC426385provided by CGNC
    Full Name
    serine/threonine kinase 35-likeprovided by CGNC
    Primary source
    CGNC:52770
    See related
    Ensembl:ENSGALG00010010859
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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    Genomic context

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    See LOC426385 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (105492329..105502623)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (105255990..105266277)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 395 Neighboring gene prepronociceptin Neighboring gene uncharacterized LOC121110418 Neighboring gene elongator acetyltransferase complex subunit 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in axon extension IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein autophosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in autophagosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase 35-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031378.2 → NP_001026549.1  serine/threonine-protein kinase 35-like

      See identical proteins and their annotated locations for NP_001026549.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000070
      UniProtKB/TrEMBL
      A0A8V0Y241, Q5ZJE9
      Conserved Domains (2) summary
      smart00220
      Location:7 → 314
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:6 → 320
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      105492329..105502623
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015285148.4 → XP_015140634.1  serine/threonine-protein kinase 35-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y241, Q5ZJE9
      Related
      ENSGALP00010014649.1, ENSGALT00010025994.1
      Conserved Domains (2) summary
      smart00220
      Location:7 → 314
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:6 → 320
      PKc_like; Protein Kinases, catalytic domain

    2. XM_015285147.4 → XP_015140633.1  serine/threonine-protein kinase 35-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y241, Q5ZJE9
      Conserved Domains (2) summary
      smart00220
      Location:7 → 314
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:6 → 320
      PKc_like; Protein Kinases, catalytic domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      105255990..105266277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046914308.1 → XP_046770264.1  serine/threonine-protein kinase 35-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y241, Q5ZJE9

    2. XM_046914309.1 → XP_046770265.1  serine/threonine-protein kinase 35-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y241, Q5ZJE9
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials