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    SRSF5 serine and arginine rich splicing factor 5 [ Gallus gallus (chicken) ]

    Gene ID: 423258, updated on 17-Aug-2024

    Summary

    Symbol
    SRSF5provided by CGNC
    Full Name
    serine and arginine rich splicing factor 5provided by CGNC
    Primary source
    CGNC:7162
    See related
    Ensembl:ENSGALG00010021516
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SFRS5
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See SRSF5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (27392315..27396898, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (27352509..27357056, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene SPARC related modular calcium binding 1 Neighboring gene solute carrier family 10 member 1 Neighboring gene microRNA 1710 Neighboring gene sushi domain containing 6 Neighboring gene coiled-coil domain containing 177

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    serine/arginine-rich splicing factor 5
    Names
    splicing factor, arginine/serine-rich 5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031197.3NP_001026368.2  serine/arginine-rich splicing factor 5

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000214
      UniProtKB/TrEMBL
      E1BY00
      Conserved Domains (2) summary
      cd12595
      Location:574
      RRM1_SRSF5; RNA recognition motif 1 (RRM1) found in vertebrate serine/arginine-rich splicing factor 5 (SRSF5)
      cd12765
      Location:98178
      RRM2_SRSF5; RNA recognition motif 2 (RRM2) found in vertebrate serine/arginine-rich splicing factor 5 (SRSF5)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      27392315..27396898 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040700967.2XP_040556901.1  serine/arginine-rich splicing factor 5 isoform X3

      Conserved Domains (1) summary
      smart00360
      Location:569
      RRM; RNA recognition motif
    2. XM_015287319.4XP_015142805.1  serine/arginine-rich splicing factor 5 isoform X2

      Conserved Domains (2) summary
      cd12595
      Location:574
      RRM1_SRSF5; RNA recognition motif 1 (RRM1) found in vertebrate serine/arginine-rich splicing factor 5 (SRSF5)
      cd12765
      Location:97177
      RRM2_SRSF5; RNA recognition motif 2 (RRM2) found in vertebrate serine/arginine-rich splicing factor 5 (SRSF5)
    3. XM_015287318.4XP_015142804.1  serine/arginine-rich splicing factor 5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK82
      Related
      ENSGALP00010031162.1, ENSGALT00010052179.1
      Conserved Domains (2) summary
      cd12595
      Location:574
      RRM1_SRSF5; RNA recognition motif 1 (RRM1) found in vertebrate serine/arginine-rich splicing factor 5 (SRSF5)
      cd12765
      Location:98178
      RRM2_SRSF5; RNA recognition motif 2 (RRM2) found in vertebrate serine/arginine-rich splicing factor 5 (SRSF5)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      27352509..27357056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046918462.1XP_046774418.1  serine/arginine-rich splicing factor 5 isoform X3

    2. XM_046918461.1XP_046774417.1  serine/arginine-rich splicing factor 5 isoform X2

    3. XM_046918460.1XP_046774416.1  serine/arginine-rich splicing factor 5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK82