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    ITFG1 integrin alpha FG-GAP repeat containing 1 [ Gallus gallus (chicken) ]

    Gene ID: 415742, updated on 3-Dec-2024

    Summary

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    Symbol
    ITFG1provided by CGNC
    Full Name
    integrin alpha FG-GAP repeat containing 1provided by CGNC
    Primary source
    CGNC:2973
    See related
    Ensembl:ENSGALG00010024314
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ITFG1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (7225001..7298018)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (7567571..7640556)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106561 Neighboring gene phosphorylase kinase regulatory subunit beta Neighboring gene uncharacterized LOC121106562 Neighboring gene uncharacterized LOC124417148 Neighboring gene neuropilin and tolloid like 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member A2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-cell immunomodulatory protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005840.2 → NP_001005840.2  T-cell immunomodulatory protein precursor

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000248
      UniProtKB/TrEMBL
      A0A8V0ZX24, Q5ZL76
      Related
      ENSGALP00010036208.1, ENSGALT00010059322.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7225001..7298018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040707061.2 → XP_040562995.1  T-cell immunomodulatory protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A107, Q5ZL76
      Related
      ENSGALP00010036184.1, ENSGALT00010059284.1

    2. XM_046899445.1 → XP_046755401.1  T-cell immunomodulatory protein isoform X2

      UniProtKB/TrEMBL
      Q5ZL76

    3. XM_040707062.2 → XP_040562996.1  T-cell immunomodulatory protein isoform X2

      UniProtKB/TrEMBL
      Q5ZL76

    4. XM_046899444.1 → XP_046755400.1  T-cell immunomodulatory protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A107, Q5ZL76

    5. XM_046899443.1 → XP_046755399.1  T-cell immunomodulatory protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A107, Q5ZL76

    6. XM_046899446.1 → XP_046755402.1  T-cell immunomodulatory protein isoform X2

      UniProtKB/TrEMBL
      Q5ZL76

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7567571..7640556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925493.1 → XP_046781449.1  T-cell immunomodulatory protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A107, Q5ZL76

    2. XM_046925496.1 → XP_046781452.1  T-cell immunomodulatory protein isoform X2

      UniProtKB/TrEMBL
      Q5ZL76

    3. XM_046925495.1 → XP_046781451.1  T-cell immunomodulatory protein isoform X2

      UniProtKB/TrEMBL
      Q5ZL76

    4. XM_046925494.1 → XP_046781450.1  T-cell immunomodulatory protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A107, Q5ZL76

    5. XM_046925492.1 → XP_046781448.1  T-cell immunomodulatory protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A107, Q5ZL76

    6. XM_046925497.1 → XP_046781453.1  T-cell immunomodulatory protein isoform X2

      UniProtKB/TrEMBL
      Q5ZL76
    Nucleotide Protein Strain
    Heading Accession and Version

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