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    XYLT1 xylosyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 414781, updated on 17-Aug-2024

    Summary

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    Symbol
    XYLT1provided by CGNC
    Full Name
    xylosyltransferase 1provided by CGNC
    Primary source
    CGNC:5099
    See related
    Ensembl:ENSGALG00010020878
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See XYLT1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (8023951..8170270)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (8020470..8166815)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106797 Neighboring gene ATP binding cassette subfamily C member 6 Neighboring gene microRNA 1786 Neighboring gene pM5 protein Neighboring gene uncharacterized LOC101748004 Neighboring gene microRNA 1644 Neighboring gene ribosomal protein S15a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heparan sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    xylosyltransferase 1
    Names
    UDP-D-xylose:core protein beta-D-xylosyltransferase
    xylosyltransferase I
    XP_015150019.2
    XP_015150020.2
    XP_040539859.1
    XP_040539860.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8023951..8170270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015294533.4 → XP_015150019.2  xylosyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z938, A0A8V0ZEV6
      Related
      ENSGALP00010029790.1, ENSGALT00010050471.1
      Conserved Domains (1) summary
      cl27418
      Location:292 → 577
      Branch; Core-2/I-Branching enzyme

    2. XM_015294534.4 → XP_015150020.2  xylosyltransferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZEV6
      Conserved Domains (1) summary
      cl27418
      Location:292 → 576
      Branch; Core-2/I-Branching enzyme

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8020470..8166815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040683925.2 → XP_040539859.1  xylosyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZEV6
      Conserved Domains (2) summary
      pfam12529
      Location:564 → 744
      Xylo_C; Xylosyltransferase C terminal
      cl27418
      Location:279 → 531
      Branch; Core-2/I-Branching enzyme

    2. XM_040683926.2 → XP_040539860.1  xylosyltransferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZEV6
      Conserved Domains (2) summary
      pfam12529
      Location:563 → 743
      Xylo_C; Xylosyltransferase C terminal
      cl27418
      Location:279 → 531
      Branch; Core-2/I-Branching enzyme
    Nucleotide Protein
    Heading Accession and Version

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