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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
Genomic
-
NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
- Range
-
966594..1030480 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_040650125.2 → XP_040506059.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X8
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (5) summary
-
- TIGR00618
Location:337 → 535
- sbcc; exonuclease SbcC
- cd12012
Location:1546 → 1607
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1687 → 1746
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 524
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cl17036
Location:662 → 705
- SH3; Src Homology 3 domain superfamily
-
XM_040650124.2 → XP_040506058.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X7
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (5) summary
-
- cd12012
Location:1553 → 1614
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1694 → 1753
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl17036
Location:669 → 712
- SH3; Src Homology 3 domain superfamily
-
XM_040650126.2 → XP_040506060.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X9
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- cd12012
Location:1454 → 1515
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1595 → 1654
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040650120.2 → XP_040506054.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Related
- ENSGALP00010044161.1, ENSGALT00010071471.1
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1941 → 2000
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040650118.2 → XP_040506052.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X3
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1942 → 2001
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040650116.2 → XP_040506050.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1965 → 2024
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_046902430.1 → XP_046758386.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X10
- UniProtKB/TrEMBL
-
A0A8V1AKV2
-
XM_040650117.2 → XP_040506051.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X2
- UniProtKB/TrEMBL
- A0A8V1AKV2, A0A8V1AMQ7
- Related
- ENSGALP00010044160.1, ENSGALT00010071470.1
- Conserved Domains (6) summary
-
- TIGR00618
Location:337 → 535
- sbcc; exonuclease SbcC
- cd12012
Location:1818 → 1879
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1959 → 2018
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:662 → 722
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 524
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:885 → 949
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
-
XM_040650121.2 → XP_040506055.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X5
- UniProtKB/TrEMBL
-
A0A8V1AJ45
- Related
- ENSGALP00010044159.1, ENSGALT00010071469.1
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1966 → 2025
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040650122.2 → XP_040506056.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X5
- UniProtKB/TrEMBL
-
A0A8V1AJ45
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1966 → 2025
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040650123.2 → XP_040506057.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X6
- UniProtKB/TrEMBL
-
A0A8V1AJ45
- Conserved Domains (5) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
RNA
-
XR_006931783.1 RNA Sequence
-
XR_005840895.2 RNA Sequence
Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
Genomic
-
NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
- Range
-
696637..760506 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_040687568.2 → XP_040543502.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X8
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (5) summary
-
- TIGR00618
Location:337 → 535
- sbcc; exonuclease SbcC
- cd12012
Location:1546 → 1607
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1687 → 1746
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 524
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cl17036
Location:662 → 705
- SH3; Src Homology 3 domain superfamily
-
XM_040687567.2 → XP_040543501.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X7
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (5) summary
-
- cd12012
Location:1553 → 1614
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1694 → 1753
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl17036
Location:669 → 712
- SH3; Src Homology 3 domain superfamily
-
XM_040687569.2 → XP_040543503.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X9
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- cd12012
Location:1454 → 1515
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1595 → 1654
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040687563.2 → XP_040543497.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1941 → 2000
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040687562.2 → XP_040543496.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X3
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1942 → 2001
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040687560.2 → XP_040543494.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1965 → 2024
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_046930384.1 → XP_046786340.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X10
- UniProtKB/TrEMBL
-
A0A8V1AKV2
-
XM_040687561.2 → XP_040543495.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8V1AKV2
- Conserved Domains (6) summary
-
- TIGR00618
Location:337 → 535
- sbcc; exonuclease SbcC
- cd12012
Location:1818 → 1879
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1959 → 2018
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:662 → 722
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 524
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:885 → 949
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
-
XM_040687564.2 → XP_040543498.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X5
- UniProtKB/TrEMBL
-
A0A8V1AJ45
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1966 → 2025
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_040687566.2 → XP_040543500.1 peripheral-type benzodiazepine receptor-associated protein 1 isoform X5
- UniProtKB/TrEMBL
-
A0A8V1AJ45
- Conserved Domains (6) summary
-
- cd12012
Location:1825 → 1886
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1966 → 2025
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:669 → 729
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- COG0419
Location:95 → 531
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00063
Location:892 → 956
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:336 → 539
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
RNA
-
XR_006936697.1 RNA Sequence
-
XR_005855141.2 RNA Sequence
-
XR_005855142.2 RNA Sequence
-
XR_005855143.2 RNA Sequence