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    STAG3 stromal antigen 3 [ Gallus gallus (chicken) ]

    Gene ID: 418671, updated on 3-Dec-2024

    Summary

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    Symbol
    STAG3provided by CGNC
    Full Name
    stromal antigen 3provided by CGNC
    Primary source
    CGNC:50825
    See related
    Ensembl:ENSGALG00010002530
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    STAGL
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    Genomic context

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    See STAG3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (130107441..130165627, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (130063156..130121346, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109391 Neighboring gene protein phosphatase 2 regulatory subunit B''beta Neighboring gene GTP binding protein 6 (putative) Neighboring gene phosphatidylinositol specific phospholipase C X domain containing 1 Neighboring gene regucalcin like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Development of a chicken 5 K microarray targeted towards immune function. Smith J, et al. BMC Genomics, 2006 Mar 13. PMID 16533398, Free PMC Article
    2. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
    3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cohesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stromal antigen 3
    Names
    stromal antigen-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277835.2 → NP_001264764.2  stromal antigen 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000025
      UniProtKB/TrEMBL
      A0A8V0XGZ8
      Related
      ENSGALP00010003623.1, ENSGALT00010005832.1
      Conserved Domains (1) summary
      cl26728
      Location:98 → 428
      STAG; STAG domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      130107441..130165627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015277701.4 → XP_015133187.2  stromal antigen 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6A7, A0A8V0XGZ8
      Related
      ENSGALP00010003627.1, ENSGALT00010005837.1
      Conserved Domains (1) summary
      cl26728
      Location:98 → 428
      STAG; STAG domain

    2. XM_015277703.4 → XP_015133189.2  stromal antigen 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XGZ8
      Conserved Domains (1) summary
      cl26728
      Location:92 → 422
      STAG; STAG domain

    3. XM_040699030.2 → XP_040554964.1  stromal antigen 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XGZ8
      Conserved Domains (1) summary
      cl26728
      Location:98 → 428
      STAG; STAG domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      130063156..130121346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908035.1 → XP_046763991.1  stromal antigen 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6A7, A0A8V0XGZ8

    2. XM_046908036.1 → XP_046763992.1  stromal antigen 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XGZ8

    3. XM_046908037.1 → XP_046763993.1  stromal antigen 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XGZ8
    Nucleotide Protein Strain
    Heading Accession and Version

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