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    SLC6A17 solute carrier family 6 member 17 [ Gallus gallus (chicken) ]

    Gene ID: 419805, updated on 3-Dec-2024

    Summary

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    Symbol
    SLC6A17provided by CGNC
    Full Name
    solute carrier family 6 member 17provided by CGNC
    Primary source
    CGNC:231
    See related
    Ensembl:ENSGALG00010025559
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC6A17 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (1383893..1399065)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (1354559..1369760)

    Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene striatin interacting protein 1 Neighboring gene tetrapeptide repeat homeobox like Neighboring gene potassium voltage-gated channel, Shaw-related subfamily, member 4 Neighboring gene RNA binding motif protein 15

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in L-leucine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in alanine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proline transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-dependent neutral amino acid transporter SLC6A17
    Names
    solute carrier family 6 (neutral amino acid transporter), member 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1383893..1399065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046904214.1 → XP_046760170.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    2. XM_046904217.1 → XP_046760173.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    3. XM_025143793.3 → XP_024999561.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    4. XM_025143794.3 → XP_024999562.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    5. XM_015299148.4 → XP_015154634.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    6. XM_046904220.1 → XP_046760176.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    7. XM_046904216.1 → XP_046760172.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    8. XM_046904219.1 → XP_046760175.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    9. XM_015299149.4 → XP_015154635.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Related
      ENSGALP00010038548.1, ENSGALT00010062354.1
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    10. XM_046904215.1 → XP_046760171.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    11. XM_046904218.1 → XP_046760174.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Related
      ENSGALP00010038551.1, ENSGALT00010062358.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1354559..1369760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046933177.1 → XP_046789133.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    2. XM_046933180.1 → XP_046789136.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    3. XM_040691514.2 → XP_040547448.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    4. XM_040691515.2 → XP_040547449.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    5. XM_040691513.2 → XP_040547447.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    6. XM_046933183.1 → XP_046789139.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    7. XM_046933179.1 → XP_046789135.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    8. XM_046933182.1 → XP_046789138.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    9. XM_040691517.2 → XP_040547451.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
      Conserved Domains (1) summary
      cd11521
      Location:60 → 648
      SLC6sbd_NTT4; Na(+)-dependent neurotransmitter transporter 4; solute-binding domain

    10. XM_046933178.1 → XP_046789134.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02

    11. XM_046933181.1 → XP_046789137.1  sodium-dependent neutral amino acid transporter SLC6A17

      UniProtKB/TrEMBL
      A0A8V1A8B1, F1NS02
    Nucleotide Protein
    Heading Accession and Version

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