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    GLRA1 glycine receptor alpha 1 [ Gallus gallus (chicken) ]

    Gene ID: 427637, updated on 17-Aug-2024

    Summary

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    Symbol
    GLRA1provided by CGNC
    Full Name
    glycine receptor alpha 1provided by CGNC
    Primary source
    CGNC:3033
    See related
    Ensembl:ENSGALG00010014234
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GLRA1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (12434258..12486014)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (12448111..12500015)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054516 Neighboring gene uncharacterized LOC107054528 Neighboring gene G3BP stress granule assembly factor 1 Neighboring gene uncharacterized LOC107054531 Neighboring gene antioxidant 1 copper chaperone Neighboring gene secreted protein acidic and cysteine rich

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellularly glycine-gated chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glycine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmitter-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycine receptor subunit alpha-1
    Names
    glycine receptor, alpha 1 (startle disease/hyperekplexia)
    glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man syndrome)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      12434258..12486014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015293917.4 → XP_015149403.1  glycine receptor subunit alpha-1 isoform X1

      Conserved Domains (1) summary
      TIGR00860
      Location:7 → 447
      LIC; Cation transporter family protein

    2. XM_025155016.3 → XP_025010784.1  glycine receptor subunit alpha-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YV58
      Related
      ENSGALP00010020141.1, ENSGALT00010034281.1
      Conserved Domains (1) summary
      TIGR00860
      Location:7 → 439
      LIC; Cation transporter family protein

    3. XM_040647171.1 → XP_040503105.1  glycine receptor subunit alpha-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 363
      LIC; Cation transporter family protein

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      12448111..12500015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040682702.2 → XP_040538636.1  glycine receptor subunit alpha-1 isoform X1

      Conserved Domains (1) summary
      TIGR00860
      Location:7 → 447
      LIC; Cation transporter family protein

    2. XM_040682703.2 → XP_040538637.1  glycine receptor subunit alpha-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YV58
      Conserved Domains (1) summary
      TIGR00860
      Location:7 → 439
      LIC; Cation transporter family protein

    3. XM_040682704.1 → XP_040538638.1  glycine receptor subunit alpha-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 363
      LIC; Cation transporter family protein
    Nucleotide Protein
    Heading Accession and Version

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