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    CX3CR1 C-X3-C motif chemokine receptor 1 [ Gallus gallus (chicken) ]

    Gene ID: 420719, updated on 17-Aug-2024

    Summary

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    Symbol
    CX3CR1provided by CGNC
    Full Name
    C-X3-C motif chemokine receptor 1provided by CGNC
    Primary source
    CGNC:9064
    See related
    Ensembl:ENSGALG00010017004
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CX3CR1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (44301481..44311092)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (44349848..44359464)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 38 Neighboring gene uncharacterized LOC101750697 Neighboring gene C-C motif chemokine receptor 8 Neighboring gene C-C motif chemokine receptor 4 Neighboring gene galactosidase beta 1 Neighboring gene transmembrane protein with metallophosphoesterase domain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemokine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CX3C chemokine receptor 1
    Names
    chemokine (C-X3-C motif) receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      44301481..44311092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_418820.8 → XP_418820.1  CX3C chemokine receptor 1

      See identical proteins and their annotated locations for XP_418820.1

      UniProtKB/TrEMBL
      A0A1D5PXC7, A0A8V0Z0U7
      Related
      ENSGALP00010024031.1, ENSGALT00010041076.1
      Conserved Domains (1) summary
      cd15186
      Location:32 → 304
      7tmA_CX3CR1; CX3C chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_040696048.2 → XP_040551982.1  CX3C chemokine receptor 1

      UniProtKB/TrEMBL
      A0A1D5PXC7, A0A8V0Z0U7
      Conserved Domains (1) summary
      cd15186
      Location:32 → 304
      7tmA_CX3CR1; CX3C chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      44349848..44359464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040665804.2 → XP_040521738.1  CX3C chemokine receptor 1

      UniProtKB/TrEMBL
      A0A1D5PXC7, A0A8V0Z0U7
      Conserved Domains (1) summary
      cd15186
      Location:32 → 304
      7tmA_CX3CR1; CX3C chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_040665807.1 → XP_040521741.1  CX3C chemokine receptor 1

      UniProtKB/TrEMBL
      A0A1D5PXC7, A0A8V0Z0U7
      Conserved Domains (1) summary
      cd15186
      Location:32 → 304
      7tmA_CX3CR1; CX3C chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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