U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C12orf75 chromosome 12 open reading frame 75 [ Gallus gallus (chicken) ]

    Gene ID: 771624, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    C12orf75provided by CGNC
    Full Name
    chromosome 12 open reading frame 75provided by CGNC
    Primary source
    CGNC:56923
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    OCC-1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See C12orf75 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (54222413..54242947, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (54513396..54533945, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene NUAK family kinase 1 Neighboring gene uncharacterized LOC107053559 Neighboring gene uncharacterized LOC121107117 Neighboring gene adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 Neighboring gene microRNA mir-12210

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    overexpressed in colon carcinoma 1 protein homolog
    Names
    overexpressed in colon carcinoma 1 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001145200.2 → NP_001138672.1  overexpressed in colon carcinoma 1 protein homolog

      See identical proteins and their annotated locations for NP_001138672.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000012
      UniProtKB/Swiss-Prot
      P0C915
      Conserved Domains (1) summary
      pfam15506
      Location:1 → 61
      OCC1; OCC1 family

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      54222413..54242947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040702165.2 → XP_040558099.1  overexpressed in colon carcinoma 1 protein homolog isoform X1

    2. XM_015286078.4 → XP_015141564.1  overexpressed in colon carcinoma 1 protein homolog isoform X3

      Conserved Domains (1) summary
      pfam15506
      Location:1 → 61
      OCC1; OCC1 family

    3. XM_015286075.4 → XP_015141561.1  overexpressed in colon carcinoma 1 protein homolog isoform X2

      Conserved Domains (1) summary
      pfam15506
      Location:1 → 61
      OCC1; OCC1 family

    4. XM_025151721.3 → XP_025007489.1  overexpressed in colon carcinoma 1 protein homolog isoform X4

      UniProtKB/Swiss-Prot
      P0C915
      Conserved Domains (1) summary
      pfam15506
      Location:1 → 61
      OCC1; OCC1 family

    RNA

    1. XR_003075566.3 RNA Sequence

    2. XR_003075568.3 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      54513396..54533945 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908652.1 → XP_046764608.1  overexpressed in colon carcinoma 1 protein homolog isoform X1

    2. XM_046908654.1 → XP_046764610.1  overexpressed in colon carcinoma 1 protein homolog isoform X3

    3. XM_046908653.1 → XP_046764609.1  overexpressed in colon carcinoma 1 protein homolog isoform X2

    4. XM_046908655.1 → XP_046764611.1  overexpressed in colon carcinoma 1 protein homolog isoform X4

      UniProtKB/Swiss-Prot
      P0C915

    RNA

    1. XR_006932743.1 RNA Sequence

    2. XR_006932742.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C915.1 GenPept UniProtKB/Swiss-Prot:P0C915

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.