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    RBMS3-AS3 RBMS3 antisense RNA 3 [ Homo sapiens (human) ]

    Gene ID: 100873979, updated on 10-Dec-2024

    Summary

    Official Symbol
    RBMS3-AS3provided by HGNC
    Official Full Name
    RBMS3 antisense RNA 3provided by HGNC
    Primary source
    HGNC:HGNC:39989
    See related
    Ensembl:ENSG00000235904 AllianceGenome:HGNC:39989
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in fat (RPKM 1.8), heart (RPKM 1.1) and 18 other tissues See more
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    Genomic context

    See RBMS3-AS3 in Genome Data Viewer
    Location:
    3p24.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (29264194..29280939, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (29266532..29283285, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (29305685..29322430, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377009 Neighboring gene mesoderm specific transcript pseudogene 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19623 Neighboring gene RNA binding motif single stranded interacting protein 3 Neighboring gene ribosomal protein S12 pseudogene 5 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:29517169-29517848 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_69111 Neighboring gene NANOG hESC enhancer GRCh37_chr3:29556777-29557394 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:29618323-29618824 Neighboring gene RBMS3 antisense RNA 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_109804.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC012262
      Related
      ENST00000798927.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      29264194..29280939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      29266532..29283285 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)